Rhodopseudomonas palustris TIE-1: Rpal_4002
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Entry
Rpal_4002 CDS
T00722
Name
(GenBank) protease Do
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Pathway
rpt01503
Cationic antimicrobial peptide (CAMP) resistance
rpt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Rpal_4002
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Rpal_4002
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rpt01002
]
Rpal_4002
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rpt03110
]
Rpal_4002
Enzymes [BR:
rpt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
Rpal_4002
Peptidases and inhibitors [BR:
rpt01002
]
Serine peptidases
Family S1: chymotrypsin family
Rpal_4002
Chaperones and folding catalysts [BR:
rpt03110
]
Other chaperones and cochaperones
DegP / HtrA
Rpal_4002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
PDZ_2
Trypsin
PDZ_6
PDZ
Tricorn_PDZ
Peptidase_S46
Motif
Other DBs
NCBI-ProteinID:
ACF02498
UniProt:
B3QEZ4
LinkDB
All DBs
Position
complement(4288937..4290442)
Genome browser
AA seq
501 aa
AA seq
DB search
MPAAIAFSSRIRPLRIRPLLAALCLGAAVIAGPAPASARGPEGIADVAEKVIDAVVNIST
TQTVDAKGSGESKGGAAPQLPPGSPFEEFFEDFFKNRRGEKGGGPRKTNSLGSGFIIDPA
GVVVTNNHVIADSDEINVILNDGAKIKAELVGVDKKTDLAVLKFKPPAGKTLTAVKFGDS
DKLRLGEWVIAIGNPFSLGGTVTAGIVSARNRDINSGPYDSYIQTDAAINRGNSGGPLFN
LAGEVIGVNTLIISPSGGSIGIGFAVPSKTVVPVVDQLRQFGELRRGWLGVRIQQVTDEI
AESLSIKPARGALVAGVDDKGPAKPAGIEPGDVVVKFDGKDIKEPKDLSRIVADTAVGKT
VDVVVIRKGKEETKQVTLGRLDDDAKPQPASAKSQPEADKPVTQKVLGLDLAALSKDLRG
RYKIKDSVKGVLVTGVDDGSDAAEKRLSAGDVIVEVAQESVGSAADIKKRVDQLKKDGKK
SVLLLVANASGELRFVALSLQ
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctgcgatcgcctttagttcccggatcaggcccttgcggatcaggccgctgctc
gccgcgctgtgcctcggcgcggctgtgatcgccggcccggcgccggcctccgcccgcggc
cccgaagggatcgccgacgtcgccgagaaggtgatcgatgcggtggtcaacatctccacc
acccagacggtcgacgccaagggctcgggcgagagcaagggcggcgccgcgccgcaactg
ccgccgggctcgccgttcgaggagttcttcgaggacttcttcaagaaccgccgcggcgaa
aagggcggcggtccgcggaagaccaattcgctcggctccggcttcatcattgatccggcc
ggcgtggtcgtgaccaacaatcacgtcatcgccgattccgacgagatcaacgtgatcctc
aacgacggcgccaagatcaaggcggagctggtcggcgtcgacaagaagaccgatcttgcg
gtgctgaagttcaagccgccggcgggcaagacgctgaccgcggtgaagttcggcgacagc
gacaagctgcggctgggcgaatgggtgatcgcgatcggcaatccgttctcgctcggcggc
accgtgaccgccggcatcgtctcggcgcgcaaccgcgacatcaactccggcccttatgac
agctacatccagaccgacgccgcgatcaatcgcggcaactccggcggtccgctgttcaac
ctcgccggcgaagtgatcggcgtgaacactctgatcatctcgccgtcgggcggctcgatc
ggcattggcttcgcggtgccgtccaagaccgtggtgccggtggtcgatcagctgcgtcag
ttcggcgaactgcgccgcggctggctcggcgtccgcatccagcaggtcaccgacgaaatc
gccgagagcctgagcatcaagccggcgcgcggcgcactggtcgccggcgtcgacgacaag
ggcccggccaagccggccggcatcgagcccggcgacgtggtggtgaagttcgacggcaag
gacatcaaggagccgaaggacctgtcgcgcatcgttgccgacaccgcggtcggcaagacc
gtcgatgtcgtggtgatccgcaagggcaaggaagaaaccaagcaggtcacgctcggccgg
ctcgacgacgatgccaagccgcaaccggcttcggcgaagtcgcagcccgaggcggacaag
ccggtgacccagaaggtgctcggtctcgatctcgccgcgctgtcgaaggatttgcgcggc
cgctacaagatcaaggacagcgtcaagggcgtgctggtgaccggtgtcgacgacggctcc
gacgcggccgagaagcggctgtcggccggcgacgtcatcgtcgaggtggcgcaggagtcg
gtcggcagcgccgccgacatcaagaagcgtgtcgatcagctcaagaaggacggcaagaag
tctgtgctgctgctggtcgccaacgcttccggcgagctgcgcttcgtcgcgctcagccta
caatag
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