Rhodopseudomonas palustris DX-1: Rpdx1_3572
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Entry
Rpdx1_3572 CDS
T01381
Name
(GenBank) protease Do
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx01503
Cationic antimicrobial peptide (CAMP) resistance
rpx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Rpdx1_3572
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Rpdx1_3572
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rpx01002
]
Rpdx1_3572
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rpx03110
]
Rpdx1_3572
Enzymes [BR:
rpx01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
Rpdx1_3572
Peptidases and inhibitors [BR:
rpx01002
]
Serine peptidases
Family S1: chymotrypsin family
Rpdx1_3572
Chaperones and folding catalysts [BR:
rpx03110
]
Other chaperones and cochaperones
DegP / HtrA
Rpdx1_3572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
PDZ_2
PDZ_6
PDZ
Trypsin
Tricorn_PDZ
Peptidase_S46
DUF6877
Motif
Other DBs
NCBI-ProteinID:
ADU45141
UniProt:
E6VDU6
LinkDB
All DBs
Position
complement(3828332..3829900)
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AA seq
522 aa
AA seq
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MHDRRSVPSSQPSHRSLSGSLLSARRFALMASVVAGLGAGAYGLGHGSFDLIGTPAQAQQ
VGANVQPSQQPVGFADIVEKVKPSVISVKVNIADKMAKGDDRDDFSFPPGSPMERFFRRF
GGEMPPGMRGHRGGGMMTGQGSGFLISADGYAVTNNHVVEGADRVEVTTDDGKTHKAKVI
GSDPRTDLALIKVEGASNFPYAKLSDGKPRIGDWVLAVGNPFGLGGTVTSGIVSAIGRDI
GNGPYDDFIQIDAPVNKGNSGGPAFNTAGEVVGVNTAIYSPSGGSIGIAFSIPASTVKAV
VEQLKDKGSVSRGWIGVQVQPVTPEIADSLGLKKAEGALVAEPQSNGPAAKAGIESGDVI
IAVDGTSVKDARELARTIGGFAPGHSVKLTVVHKGKERELTLTLGELPNKIEASATDRGD
RGRSSQGLDLPKLGLTLAPASSVAGAGKDGVVVTDVDPKGAAADRGFKEGDVILEVAGKN
VSSPADVRDVLATAKTENKNSVLVRVRSGGASRFVALPIAKG
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgcacgatcgccgttccgttccgtcctcgcagccgtcgcatcggtcgctctccggctcg
ctgctgtccgcgcgcagattcgcgctgatggcttcggtggtggccggtctcggtgcgggc
gcttacgggctcggccatggctcgttcgatctgatcggcacgccggcgcaggcgcagcag
gtcggtgccaatgtgcagccgtcgcagcagccggtcggcttcgccgacatcgtggagaag
gtgaagccgtcggtgatttcggtgaaggtcaacatcgccgacaagatggccaagggcgac
gaccgcgacgacttctcgtttccgcccggctcgccgatggagcggttcttccgccggttc
ggcggggaaatgccgcccggaatgcgcggccatcgcggcggcggcatgatgaccggccag
ggctcgggcttcctgatctcggccgacggttacgccgtgaccaacaatcacgtcgtcgaa
ggcgccgaccgggtcgaggtcaccaccgatgacggcaagacccacaaggccaaggtgatc
ggcagcgatccgcgcaccgatctggcgctgatcaaggtcgaaggcgcttcgaacttcccc
tacgccaagctgtcggacggcaagccgcggatcggcgactgggtgcttgcggtcggcaat
ccgttcggcctcggcggtaccgtcacgtcgggcatcgtctcggcgatcgggcgtgacatc
ggcaacggtccgtatgacgatttcatccagatcgacgccccggtgaacaagggcaattcc
ggcggaccggcgttcaacaccgctggcgaggtggtcggcgtcaacaccgcgatctactcg
ccgtcgggcggcagtatcggcattgccttctcgatcccggcatcgaccgtcaaggccgtc
gtcgagcagctcaaggacaagggctcggtcagtcgcggctggatcggcgtgcaggtgcag
ccggtgaccccggagattgccgacagcctcggcctgaagaaggcggaaggcgcgcttgtc
gccgagccgcagtcgaacggccccgccgccaaagcgggcatcgaatccggcgacgtgatc
atcgcggtcgacggcacctcggtgaaggacgcccgcgaactggcgcgcaccatcggcggc
ttcgcccccggccactcggtcaagctgaccgtggttcacaagggcaaggagcgcgagctg
acgctgacgctcggcgaattgccgaacaagatcgaagccagcgccaccgaccgcggtgat
cgaggccggtcgagccagggcctcgatctgccgaagctcggcctgacgctggcgccggcc
agttcggtcgccggtgccggtaaggatggtgtggtggtcaccgacgtcgatccgaagggc
gccgccgccgaccgcggcttcaaggaaggcgacgtgatcctcgaggtcgccggcaagaac
gtgtcgagcccggcggacgtccgcgacgtgctcgccacggcgaagaccgaaaacaagaac
agcgtgctggtccgggtacgcagcggcggcgcttcgcgcttcgtcgccctcccgatcgcc
aagggctga
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