KEGG   Roseiflexus sp. RS-1: RoseRS_0623
Entry
RoseRS_0623       CDS       T00542                                 
Name
(GenBank) AMP-dependent synthetase and ligase
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
rrs  Roseiflexus sp. RS-1
Pathway
rrs00061  Fatty acid biosynthesis
rrs00071  Fatty acid degradation
rrs01100  Metabolic pathways
rrs01212  Fatty acid metabolism
rrs02024  Quorum sensing
Module
rrs_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:rrs00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    RoseRS_0623
   00071 Fatty acid degradation
    RoseRS_0623
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RoseRS_0623
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rrs01004]
    RoseRS_0623
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rrs04147]
    RoseRS_0623
Enzymes [BR:rrs01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     RoseRS_0623
Lipid biosynthesis proteins [BR:rrs01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   RoseRS_0623
Exosome [BR:rrs04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   RoseRS_0623
  Exosomal proteins of breast cancer cells
   RoseRS_0623
SSDB
Motif
Pfam: AMP-binding
Other DBs
NCBI-ProteinID: ABQ89045
UniProt: A5UQZ2
LinkDB
Position
773340..775283
AA seq 647 aa
MDNATLPRLLIENARRLGNRVALREKDFGIWQTVTWRQFADHVRAFAMGLRALGVERGDK
VAIIGDNRPEWLYAELAAQAIGGASIGIYQDSVAEEVRYLVEASDARVIVAEDQEQVDKI
IEIWSHLRGVLKVIYYEPKGLRSYREPYLAGFPDIEELGRAFDRKHPGLFEAEVAQGHPD
DIAILSTTSGTTGKPKLAMLTHRNLISQGAGLLAVDPLGPDDEFVSFLPLAWVGEQMITV
AAGLQCGLTINFPESTDTVQENIREIGPRVMFSPPRIWENMLSQVQVKIQDSTRLKRAVY
EWGLRQGYAMADARFNGATPGLLLRLKYALARLIVFEELKDHLGLRFIKRAYTGGAALGP
DVFRFYHAIGVNLKQVYGQTESAGLSVIHRDGQIKFQTVGTPLPNTEVRIAANGEILVKG
PSVFIGYYRNPEATAETLRDGWLHSGDAGYFDEDGHLVVIDRAKDVMTLSDGTIFSPQFI
ENKLKFSPYVKEAVVFGGNWPFVTAIINIDFANVGKWAENAQISYTTYTDLAQKPEVYAL
IRRDVERTNADLPPAARIQRFLLLHKELDADDGELTRTRKVRRRLIAERYREIVESLYGD
QSDIEVETTITYQDGRTALIKTRLRIEAMEEAAMVETNGRMARALAR
NT seq 1944 nt   +upstreamnt  +downstreamnt
atggacaatgcgacgcttccgcgcctgttgatcgaaaatgcccggcgcttgggcaaccgg
gttgcgctccgtgagaaagatttcggcatctggcagacggtcacctggcggcagttcgcc
gatcatgtgcgagcattcgcaatgggcctgcgcgcgctgggggtcgagcgtggcgacaag
gtggcgattatcggcgacaaccgccctgagtggctctacgccgaactggccgcccaggcg
atcggcggcgcctcgatcggcatctaccaggactcggtcgccgaagaggtgcgctacctg
gtcgaggcgtccgatgcgcgcgtgattgtggctgaggatcaggagcaggtcgataaaatc
atcgaaatctggtcccacctgcgcggtgtgctcaaggtcatttactatgagccgaagggg
ttgcgcagttaccgcgagccatacctggccggtttccccgacattgaagaactggggcgc
gcctttgaccgcaagcaccccggtttgtttgaggccgaagtggcacaggggcatcccgac
gacatcgccattctctcgaccacgtcgggcacgacgggcaagcccaaactggcgatgctg
acccatcgcaacctgatcagtcagggcgccggactgctggcggtcgatccgctgggaccg
gacgatgagtttgtgagtttcctgccgctggcgtgggttggcgaacagatgatcaccgtg
gctgccggtctccagtgcggcttaacgatcaacttcccagaatcgaccgatacagtgcag
gagaacattcgtgagatcggtccgcgggtgatgttttcgccgccgcgcatctgggagaac
atgctctcgcaggtgcaggtgaaaatccaggacagcacacggctcaaacgagcagtctat
gagtggggattgcggcaggggtacgccatggcggacgctcgcttcaatggcgcgacgcct
ggtctgctcttgcgcctgaagtatgcgctggcgcgcctgatcgtcttcgaggaactgaag
gatcatctggggttgcgcttcatcaagcgcgcctacaccggcggcgccgcgcttggtcct
gatgtctttcgtttctatcacgccatcggcgtcaatctgaagcaggtctacggtcagacc
gaaagcgccggtctcagtgtcattcaccgcgacgggcagatcaagttccagacggttggc
acgccccttcccaataccgaggttcggattgctgcaaatggcgagattctggtcaagggc
ccatcggtgttcatcgggtactaccggaacccggaagcgaccgccgaaacgctgcgggat
ggctggttgcacagcggcgatgcaggctacttcgacgaagacgggcacctggtggtgatc
gaccgcgcgaaagatgtgatgacactcagcgatggaacgatcttctcgccgcagttcatc
gaaaataaactgaagttcagcccctatgtcaaagaagcggtcgtgttcggcggcaactgg
cccttcgtcaccgcaatcatcaacatcgacttcgccaatgttgggaagtgggctgagaat
gcgcagatctcctacaccacctacaccgatctggcgcagaaaccggaggtctacgcgctg
atccgcagggacgtggagcgcacgaacgccgatcttccgccagcagcgcgcatccagcgc
tttctcctgctgcacaaggaactcgacgcggatgacggcgaactgacgcgcacccgcaaa
gtccgccgccgcctgatcgccgagcgctaccgcgagatcgtggagtcgttgtacggcgat
cagagcgacatcgaggttgagaccacgatcacctatcaggatggtcggacggcgttaatc
aaaacgcgcctgcgcatcgaagccatggaggaagcagcgatggtcgaaaccaatggtcgg
atggcgcgcgcgcttgccaggtag

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