Roseiflexus sp. RS-1: RoseRS_0623
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Entry
RoseRS_0623 CDS
T00542
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
rrs
Roseiflexus sp. RS-1
Pathway
rrs00061
Fatty acid biosynthesis
rrs00071
Fatty acid degradation
rrs01100
Metabolic pathways
rrs01212
Fatty acid metabolism
rrs02024
Quorum sensing
Module
rrs_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RoseRS_0623
00071 Fatty acid degradation
RoseRS_0623
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RoseRS_0623
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rrs01004
]
RoseRS_0623
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rrs04147
]
RoseRS_0623
Enzymes [BR:
rrs01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RoseRS_0623
Lipid biosynthesis proteins [BR:
rrs01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
RoseRS_0623
Exosome [BR:
rrs04147
]
Exosomal proteins
Exosomal proteins of breast milk
RoseRS_0623
Exosomal proteins of breast cancer cells
RoseRS_0623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-ProteinID:
ABQ89045
UniProt:
A5UQZ2
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All DBs
Position
773340..775283
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AA seq
647 aa
AA seq
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MDNATLPRLLIENARRLGNRVALREKDFGIWQTVTWRQFADHVRAFAMGLRALGVERGDK
VAIIGDNRPEWLYAELAAQAIGGASIGIYQDSVAEEVRYLVEASDARVIVAEDQEQVDKI
IEIWSHLRGVLKVIYYEPKGLRSYREPYLAGFPDIEELGRAFDRKHPGLFEAEVAQGHPD
DIAILSTTSGTTGKPKLAMLTHRNLISQGAGLLAVDPLGPDDEFVSFLPLAWVGEQMITV
AAGLQCGLTINFPESTDTVQENIREIGPRVMFSPPRIWENMLSQVQVKIQDSTRLKRAVY
EWGLRQGYAMADARFNGATPGLLLRLKYALARLIVFEELKDHLGLRFIKRAYTGGAALGP
DVFRFYHAIGVNLKQVYGQTESAGLSVIHRDGQIKFQTVGTPLPNTEVRIAANGEILVKG
PSVFIGYYRNPEATAETLRDGWLHSGDAGYFDEDGHLVVIDRAKDVMTLSDGTIFSPQFI
ENKLKFSPYVKEAVVFGGNWPFVTAIINIDFANVGKWAENAQISYTTYTDLAQKPEVYAL
IRRDVERTNADLPPAARIQRFLLLHKELDADDGELTRTRKVRRRLIAERYREIVESLYGD
QSDIEVETTITYQDGRTALIKTRLRIEAMEEAAMVETNGRMARALAR
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggacaatgcgacgcttccgcgcctgttgatcgaaaatgcccggcgcttgggcaaccgg
gttgcgctccgtgagaaagatttcggcatctggcagacggtcacctggcggcagttcgcc
gatcatgtgcgagcattcgcaatgggcctgcgcgcgctgggggtcgagcgtggcgacaag
gtggcgattatcggcgacaaccgccctgagtggctctacgccgaactggccgcccaggcg
atcggcggcgcctcgatcggcatctaccaggactcggtcgccgaagaggtgcgctacctg
gtcgaggcgtccgatgcgcgcgtgattgtggctgaggatcaggagcaggtcgataaaatc
atcgaaatctggtcccacctgcgcggtgtgctcaaggtcatttactatgagccgaagggg
ttgcgcagttaccgcgagccatacctggccggtttccccgacattgaagaactggggcgc
gcctttgaccgcaagcaccccggtttgtttgaggccgaagtggcacaggggcatcccgac
gacatcgccattctctcgaccacgtcgggcacgacgggcaagcccaaactggcgatgctg
acccatcgcaacctgatcagtcagggcgccggactgctggcggtcgatccgctgggaccg
gacgatgagtttgtgagtttcctgccgctggcgtgggttggcgaacagatgatcaccgtg
gctgccggtctccagtgcggcttaacgatcaacttcccagaatcgaccgatacagtgcag
gagaacattcgtgagatcggtccgcgggtgatgttttcgccgccgcgcatctgggagaac
atgctctcgcaggtgcaggtgaaaatccaggacagcacacggctcaaacgagcagtctat
gagtggggattgcggcaggggtacgccatggcggacgctcgcttcaatggcgcgacgcct
ggtctgctcttgcgcctgaagtatgcgctggcgcgcctgatcgtcttcgaggaactgaag
gatcatctggggttgcgcttcatcaagcgcgcctacaccggcggcgccgcgcttggtcct
gatgtctttcgtttctatcacgccatcggcgtcaatctgaagcaggtctacggtcagacc
gaaagcgccggtctcagtgtcattcaccgcgacgggcagatcaagttccagacggttggc
acgccccttcccaataccgaggttcggattgctgcaaatggcgagattctggtcaagggc
ccatcggtgttcatcgggtactaccggaacccggaagcgaccgccgaaacgctgcgggat
ggctggttgcacagcggcgatgcaggctacttcgacgaagacgggcacctggtggtgatc
gaccgcgcgaaagatgtgatgacactcagcgatggaacgatcttctcgccgcagttcatc
gaaaataaactgaagttcagcccctatgtcaaagaagcggtcgtgttcggcggcaactgg
cccttcgtcaccgcaatcatcaacatcgacttcgccaatgttgggaagtgggctgagaat
gcgcagatctcctacaccacctacaccgatctggcgcagaaaccggaggtctacgcgctg
atccgcagggacgtggagcgcacgaacgccgatcttccgccagcagcgcgcatccagcgc
tttctcctgctgcacaaggaactcgacgcggatgacggcgaactgacgcgcacccgcaaa
gtccgccgccgcctgatcgccgagcgctaccgcgagatcgtggagtcgttgtacggcgat
cagagcgacatcgaggttgagaccacgatcacctatcaggatggtcggacggcgttaatc
aaaacgcgcctgcgcatcgaagccatggaggaagcagcgatggtcgaaaccaatggtcgg
atggcgcgcgcgcttgccaggtag
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