Rhodococcus ruber: CS378_16520
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Entry
CS378_16520 CDS
T05142
Name
(GenBank) integrase
Organism
rrz
Rhodococcus ruber
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Gene cluster
GFIT
Motif
Pfam:
Mu-transpos_C
HTH_32
rve
HTH_29
HTH_28
His_Phos_2
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ATQ31978
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Position
3646694..3648802
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AA seq
702 aa
AA seq
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MRSPRPVVSVGDRVVFEGTAHAVVALSGTKIRLLSEAGESSVVALSFLLAAEDFELVGAA
PAPKIEPSNLLASLPEKVLEAARDWECHVIEVETGLLPDTPEDAQPRPGYDPTVFSLKSR
ETRKAAELTAAGRKTSARTVQRMRQRYREQGLWGLVDTRYTRTAAPTGQVDPRVIAAATA
VIDAQTGTSTGTKSRVIARVKQMLDDEHGPGVVPMPSKTTFYRLLDVLAQGRHTFGSALT
RRSAAHRPDKVYTPATAARPGELVHLDTTPIDVMAVMDNGVIGRAELVLAVDIATRTIGA
GVLRPVGAKAVDAALMLARMSVPEPMRPGWDHALALAASRIPYRRLVTLDARMAMAAAKP
VIVPDTVVIDHGKVFMSEVFARAADTLGISVQPAHVLTPTDKAIVERTFSSINTLFCQHV
SGYTGRDVTRRGTDVDERAVWSLADLQELFDEWVLAGWQTRPHEGLRHPFSPTENASPND
VYAALIAAAGYVPVTLTGEDYVELLPAQWRAIGDAGVQIDYRTYNSSELRGFAGESSGIV
PKGGRWEVHYDPYDVSRVWVRNHRGRGWITVPWTHRNIVRQPFADFTWRAARKLAAQRGV
DDANEMAVAVILAALLRRAEAGPDTRRPLARHACTREMPNHLPVEVTEVGRWPTALPEPA
RPPALPPALPVQAESDPTIEADAETVVPFGLLDAFDEQEGRW
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcgccacgtccggtggtgtcggtcggcgaccgggtcgtgttcgagggcacggcg
cacgcggtcgtcgcgctctcgggtaccaagatccgcttgttgtccgaggcgggcgaatcg
agcgtggtggcgttgtcgttcctgctggcagcggaggacttcgaactggtcggtgcggct
ccggcaccgaagatcgagccgagcaacttgctcgcatcgctgccggagaaggtgctggag
gcggccagggactgggaatgtcacgtgatcgaggtcgagacgggtctgcttccggacact
ccggaggatgcgcagccgcggccggggtacgacccgacggtgttctcgctgaagtcgagg
gagacgcgaaaggccgcggagctgaccgcggccggccgcaagaccagcgcccgcacggtg
cagcggatgcggcagcgctaccgcgagcaggggttgtgggggctggtcgacacccgctac
accaggacggccgcgccgaccgggcaggtcgacccgcgggtgattgccgcggcgacggcg
gttatcgacgcccagaccggcacgtcgacgggcacgaaatcgcgggtcatcgcgagggtg
aagcagatgctcgacgacgaacacgggcccggggtggtgccgatgccgtcgaagacgacg
ttctaccggctgctggacgtgctggcccagggccggcacacgttcggttcggcgctcacc
cgccggtcggcggcgcacaggcccgacaaggtctacaccccggccaccgccgcgcggccg
ggggagctggtgcatctggacaccaccccgatcgatgtgatggcggtgatggacaacggg
gtgatcggtcgcgccgagctcgtgctggccgtcgatatcgccacccgcaccatcggcgcg
ggagtgctccggccggtcggcgcgaaagccgtcgacgctgcgctgatgctggcgcggatg
agcgttcccgagccgatgcggccgggctgggaccatgcgctggcgctggcggcgtcgcgg
atcccgtatcggcggctggtgacactggacgcgcggatggcgatggcggccgccaaaccg
gtgatcgtcccggacaccgtcgtgatcgaccacggcaaggtgttcatgtcggaggtgttc
gcccgcgccgcggacaccttgggcatctcggtgcagcccgcgcacgtgctgaccccgacc
gacaaggccatcgtcgaacgcaccttctcctcgatcaataccctgttctgccagcatgtt
tccggctacaccggccgcgacgtcacccgccgcggcaccgacgtcgacgagcgcgccgtc
tggtcgctggcggatctgcaggagttgttcgacgaatgggtgctggccggttggcagacc
cgcccgcacgaggggctgcggcaccccttcagccccaccgagaacgcgtcaccgaacgat
gtctacgcggcgctgatcgccgcggccgggtatgtcccggtcaccttgaccggcgaggac
tatgtcgagttgttgccggcgcaatggcgcgccatcggcgatgccggtgttcagatcgac
taccgcacctacaacagcagcgagctgcgcggtttcgccggggaatcctcgggcatcgtc
cccaagggcggccgctgggaggtccattacgacccctacgacgtctcgcgggtctgggtc
cggaaccaccgcggccgcggctggatcaccgtcccgtggacgcaccggaacatcgtgcgg
cagccgttcgccgatttcacctggcgcgcagcacggaaactggcagcgcagcgcggcgtc
gacgacgccaacgagatggcggtcgcggtgatcctggccgcgctgctgcgccgcgccgaa
gccggccccgacacccgccgtccgctggctcgccatgcgtgcacccgcgagatgcccaac
cacctgcccgtggaggtcaccgaggtcggccgatggcccaccgccctgcccgaaccggcc
cggcccccggcgttgccgcccgcactgccggtccaggcggaatcggatccgacgatcgag
gccgacgccgagaccgtggtgccgttcgggctgctcgatgccttcgacgagcaggaaggc
cgctggtga
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