Cereibacter sphaeroides ATCC 17029: Rsph17029_0856
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Entry
Rsph17029_0856 CDS
T00484
Name
(GenBank) choline dehydrogenase
KO
K00108
choline dehydrogenase [EC:
1.1.99.1
]
Organism
rsh
Cereibacter sphaeroides ATCC 17029
Pathway
rsh00260
Glycine, serine and threonine metabolism
rsh01100
Metabolic pathways
Module
rsh_M00555
Betaine biosynthesis, choline => betaine
Brite
KEGG Orthology (KO) [BR:
rsh00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Rsph17029_0856
Enzymes [BR:
rsh01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.1 choline dehydrogenase
Rsph17029_0856
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Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_N
GMC_oxred_C
FAD_binding_2
NAD_binding_8
DAO
Pyr_redox_2
Lycopene_cycl
Pyr_redox_3
HI0933_like
FAD_oxidored
GIDA
ApbA
Thi4
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
ABN75967
UniProt:
A3PI01
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All DBs
Position
1:873871..875517
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AA seq
548 aa
AA seq
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MFDYIIVGAGSAGCAMAYRLGEAGRSVLVVEHGGTDAGPFIQMPAALSYPMNMGIYDWGL
KTEPEPHLDGRVLATPRGKVIGGSSSINGMVYVRGHARDFDHWAESGATGWGFADVLPYF
KRMENWHVPGDVEWRGHDGPLHVTRGPRSNPLFNAFIEAGRQAGYPVTDDYNGAAQEGFG
PMEATIWQGRRWSAANAYLRPAMKRFGVQLTRALALKVVIEEGRAVGVEVQRRGGREVIR
AGREVILAASSLNTPKLLMLSGIGSAAHLAEHGIPVVADRPGVGRNLQDHLEVYMQFASL
QPVTLFKHWNLRGKVSIGAQWLFTGRGLGASNQFEACAFIRSKPGVDYPDIQYHFLPIAV
RYDGKAAAEGHGFQVHVGPMRSPSRGSVTLRSADPEAPPVIRFNYMSTEEDWQDFRRCVR
LTREIFGQEAFKPFVRHEIQPGAACASDAEIDAFIRAHVESAYHPCGTARIGRADDPMAV
VDPECRVIGVEGLRVADSSIFPRVTNGNLNAPSIMVGEKASDHILGRTPLAPLNLEPVTN
PNWRTAQR
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgttcgattacatcatcgtcggcgccggctcggccggctgtgccatggcctatcgcctc
ggcgaggcgggccgctcggtgctggtcgtcgagcatggcggcacggatgccgggcccttc
atccagatgcccgcggcgctctcctatccgatgaacatggggatctacgactggggcctg
aagaccgagcccgagccgcatctggacgggcgcgtgctcgccacgccgcgcggcaaggtg
atcggcggctcctcctcgatcaacggcatggtctatgtccgcggtcacgcgcgcgatttc
gaccattgggccgagagcggggccaccggctggggctttgccgatgtgctgccctatttc
aagcggatggagaactggcacgtccccggcgatgtcgagtggcgcggccatgacgggccg
ctgcacgtcacgcgcggcccgcgctccaatcccctgttcaacgccttcatcgaggcgggg
cggcaggcgggctatccggtgaccgacgattacaacggcgcggcgcaggagggcttcggc
ccgatggaggccacgatctggcagggccggcgctggtcggccgccaatgcctatctcagg
cccgcgatgaagcggttcggggtccagctcacccgtgccctcgcgctgaaggtggtgatc
gaggagggccgtgccgtcggcgtcgaggtgcagcgccgcggcggccgcgaggtgatccgg
gccggccgcgaggtgatcctcgccgcctcctcgctcaacacgccgaagcttctgatgctg
tcgggcatcgggtccgccgcgcatctggccgagcacgggatcccggtcgtggccgaccgg
ccgggcgtgggccggaacctccaggaccatctggaggtctacatgcagttcgcgagcctc
cagccggtcacgctcttcaagcactggaacctgcgcggcaaggtcagcatcggcgcgcag
tggctgtttaccgggcgcgggctcggggcctcgaaccagttcgaggcctgcgccttcatc
cgctcgaagccgggcgtggattatcccgacatccagtatcacttcctgcccattgccgtg
cgctacgacggcaaggccgccgccgagggccacggcttccaggtgcatgtggggccgatg
cgctcgccctcgcgcgggtcggtgacgctgcgctcggccgatcccgaggcgccgccggtg
atccgcttcaactacatgtcgaccgaagaggattggcaggacttccgccgctgcgtccgc
ctcacgcgcgagatcttcgggcaggaggccttcaagcccttcgtccggcacgagatccag
ccgggggcggcctgcgcttcggacgcggagatcgacgccttcatccgcgcgcatgtcgag
agcgcctaccacccctgcgggacggcgcggatcgggcgggcggacgatccgatggcggtc
gtcgatcccgagtgccgggtgatcggggtcgaggggctgcgcgtggccgacagttcgatc
ttcccgcgggtgacgaacggcaacctcaacgcgccctcgatcatggtgggcgagaaggcg
tccgaccatatcctcggccggaccccgctcgcgccgctgaacctcgagccggtgacgaac
ccgaactggcgcacggcccaacgctga
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