Runella slithyformis: Runsl_0088
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Entry
Runsl_0088 CDS
T01553
Name
(GenBank) Alpha-L-fucosidase
KO
K01206
alpha-L-fucosidase [EC:
3.2.1.51
]
Organism
rsi
Runella slithyformis
Pathway
rsi00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Runsl_0088
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsi04147
]
Runsl_0088
Enzymes [BR:
rsi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
Runsl_0088
Exosome [BR:
rsi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Runsl_0088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BNR_2
Alpha_L_fucos
F5_F8_type_C
GHL6
BNR_3
BNR
Motif
Other DBs
NCBI-ProteinID:
AEI46547
UniProt:
A0A7U3ZG09
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All DBs
Position
110338..112758
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AA seq
806 aa
AA seq
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MHLKSVFFLLFAFAGATLFAQTPAVLLVKEEFIFDTPPVPSCHASSIVQLGDQHLMATWF
GGTAEGKPDVTIWLAEYRKGKWGQPKQMADGIMDAGKRYPCWNPVLFKTREGKLMLYYKV
GPNPREWWGMVRYSTDNGKNWSAPEKLPEGIMGPIKNKPIQLPNGDILHPTSTESVTGNI
WHVHLEKTDKNGKNWQKISIDNGDFGAIQPSILTYPDGKMQMLCRSRQNVVVQTWSSDGG
KTWSPVSALSLPNPNSGTDAVTLKNGTQILIYNPLIRGSDWAKGRNKLRVAASKDGTNWQ
DIYTLEDEGKGEFSYPAVIQTTDGLVHITYTHERKNVKHVVLKVPDVLPPKPVGPTPSKA
QMGWHEMEQNAFIHFTTNTFTDLEWGYGDEKPSIFNPTQTDVDQWIKTLKEAGFKGAILT
CKHHDGFTLFPSQYTEHSIKNSPYKNGKGDIVREVADACKKYGLKFGVYLSPWDRNHPEY
GKPGYVEYYRNQLKEIFTNYGPAFEMWFDGANGGDGYYGGAREKRQIKGSTYYDWPKTLD
LVRQMEPNVIFFSDAGPGVRWVGNERGVAGETNWNSITPDTLFAGKGGIEKLLNTGSEDG
TQWIPAEVDVSIRPGWFYHAKEDAKVRTPENLFDIYLTSVGRGSTLLLNVPPDRRGLIHE
NDVKALQGWRALIDREFKTNLAANAKVKASAYRGNVANYAPGNLTDGNKETYWTTNDDVT
TGSVEIDLGKPQTVKYITLKEYIALGQRVKAFEVEAWQNGAWQKVAQATTIGYKRILKLT
PVQTDKIRVTITASKASPVLSAVEVY
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgcatctaaaatcagtcttttttctactatttgcttttgcaggcgctaccctttttgcc
cagaccccggccgttttgttggtcaaagaggaatttatttttgatacaccgcctgttccg
tcctgccatgcctcaagcattgtgcaactcggcgaccaacacctcatggccacgtggttt
ggcggtaccgccgaaggaaaacccgacgtcaccatctggttggccgaataccgaaaagga
aaatgggggcagcccaaacaaatggctgacggcatcatggacgccggcaaacgctatccg
tgctggaatcccgtattgttcaaaacccgcgaaggtaagcttatgctgtattacaaagta
gggcccaatccgcgcgagtggtggggaatggtgcgctattcgaccgataacggcaaaaac
tggtctgcgcccgaaaaactgcccgaaggcattatgggccccatcaagaataaacccatt
cagctccccaacggtgacattctgcacccgacgagtacggaaagcgtgacgggaaatatt
tggcatgtacatttggaaaaaaccgacaaaaacgggaagaattggcaaaagatcagcatc
gacaacggcgatttcggggcgattcagcccagtatcctcacctaccctgacggcaaaatg
cagatgctttgccgcagccgtcagaatgtggtcgtacaaacatggtccagcgacggcggg
aagacctggagcccggtcagtgcactcagcctgccgaatccaaactcaggaaccgatgca
gtgacgctcaaaaacggcacccaaatcctgatctacaacccgcttattcgcggcagcgac
tgggccaaagggcgtaataagctgcgcgtagctgcctccaaagacggtaccaactggcag
gacatttatacactggaagacgaaggcaaaggggaattcagttacccggccgtgattcaa
accaccgacggcctcgtacacatcacctacacgcatgagcgcaaaaacgtgaagcacgtg
gtgttgaaagtacccgatgtattaccgcccaagcccgtaggccctaccccttcgaaagca
cagatgggttggcacgaaatggaacaaaatgcgtttatccacttcacaaccaacaccttc
acggatttggaatggggctacggcgacgagaagccctccattttcaaccctactcaaacg
gacgtggaccaatggatcaaaacgctcaaagaggccggttttaaaggagctattctgacc
tgcaaacaccacgacggattcacgctcttccccagccaatacaccgagcattcgatcaaa
aacagtccttacaaaaacggcaaaggtgatatagtccgggaagtggccgatgcctgcaaa
aagtacggtctgaagttcggcgtgtacctttcgccctgggatcgcaatcaccccgaatac
ggcaagccgggctatgtagaatattaccgtaaccaactgaaagaaatcttcaccaattac
ggtccggcgttcgaaatgtggtttgacggtgccaacggcggcgacggctactacggcggc
gcccgcgaaaaacggcagatcaaaggctcgacgtactacgattggcccaaaacactggat
ctggtgcgccaaatggagcctaatgtcatctttttcagcgatgccggcccgggcgtacgt
tgggtaggaaacgaacgcggcgtagcaggcgaaaccaactggaacagcattacgcccgat
acactgtttgcgggaaaaggcggcattgaaaaactgctgaacacgggttctgaagacggc
acccagtggattccggccgaggtagatgtatcaatccgaccgggctggttttaccacgcc
aaagaagatgccaaagtacgcacacccgaaaacctatttgacatttatctgacttcggta
ggacgcggctccacgctcctgctcaatgtaccgcccgatcgccgggggcttattcacgaa
aatgatgtaaaagccctgcagggctggcgcgcgctgatcgaccgggaatttaaaaccaat
ctggccgccaacgcgaaagtaaaagcctccgcttaccgaggaaacgtcgccaattatgcc
ccgggaaacctcacggacggcaacaaagaaacctactggaccaccaacgacgacgtcacg
acaggcagcgtggaaattgatctggggaaacctcaaaccgtaaaatacattacgctcaaa
gaatacattgccctggggcaacgcgtgaaagcgtttgaggtagaggcttggcaaaacggt
gcctggcaaaaagtagctcaggccacgaccatcggctataagcgtatcctgaaacttacg
ccggtgcagaccgataagatccgggtaaccatcaccgcttccaaagcctctccggtcctt
tccgccgttgaggtgtactga
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