Runella slithyformis: Runsl_0669
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Entry
Runsl_0669 CDS
T01553
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rsi01011
]
Runsl_0669
Enzymes [BR:
rsi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Runsl_0669
Peptidoglycan biosynthesis and degradation proteins [BR:
rsi01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Runsl_0669
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
Motif
Other DBs
NCBI-ProteinID:
AEI47112
UniProt:
A0A7U3ZH34
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All DBs
Position
796909..799083
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AA seq
724 aa
AA seq
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MKRTSTLTFFLSFFTLSSLSAQAPVVPVIPTSVGFAGMNIQIDQDARAIIQSDVKALLSN
RKYWESKLDRCVMHFPIIEGILIDEDVPTDFKFLALQESGLQPDAVSASNAVGFWQFKRE
TAVDYGLRVDDMIDERKNISASTRAAAKYLKKSNTLFNNWIASLYSYYLGAGGISKNIPG
EWSYAKEVKLTGKSDRYILRFLAHKIAVESAIDRYQTPVQTVLLEYPQAKGRTLQSIAAE
LNIDEATLRRENSWLNVNEIPNDRDYSLIVPVANDQLSATRTRIASAQKPNLRDNFAQKD
IGFPVLVRAEGYSNDLLLYEINGLPGIMAGGNDNVETLARKAKISFSSFLRYNEMSERDP
IVPGDVYYLAKKGKRAAVPFHTVREGESLWKVSQVYGIRVKYIVKNNRIDNRNQRPQTGR
VLWLTKKRPRNTPVEVVDMPLEEWLPGNGKSQPRPGVQENSRSETAPVTSAKIPQNPSER
KVYTPKMADTPPPVKTQPTETNESLGVEITDAASVPKKSTSTTDQPTKPTKRAPSFNPTD
DDRVVIINDDEPVKRPVANKQTVKTAAGKQQMVVKNTPPAAPKEPVEEPIVIANEKPKPA
APAKPSPTTATANNKSLTHTVEPGQTFYSISKMYDVTVNDILYWNNLPQDAKLLSGQKLT
IRPVGNTLSQQPKADEFVSHTVVQGETMFSISKKYGVKMDEIKEWNGLPDTGVKIGQQLK
IKKQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaacctcaaccctcactttctttctttctttctttaccctttcgtccctctcg
gcgcaggcacctgttgttccggtcattcccacaagcgtcggttttgcgggcatgaatatt
cagattgatcaagatgcccgtgccattattcaatcggacgtcaaagccctgctcagcaac
cgcaagtattgggaatctaaattagatcgctgtgtgatgcactttcccattattgaaggc
attttgatcgatgaagatgttcctacagacttcaaatttctggcattgcaggaaagcggg
cttcaacccgatgccgtttccgcttccaatgcggttggcttttggcagttcaaaagagaa
acagccgttgattacggcctgcgcgttgatgacatgatcgatgagcgtaagaacatttcg
gcttctacccgggcggcggccaagtatctcaaaaaaagcaatacgctgtttaacaactgg
atcgcttctttgtactcgtattatctgggcgcgggtggcatcagcaaaaatattcccggt
gaatggtcttatgccaaagaggtaaaattgacagggaaatcagaccgctacattctgcgt
ttcctggcgcacaaaattgcggtcgagtctgccattgatcgctatcaaacgcccgttcag
accgtcctgttggaatatcctcaggccaaaggaagaacacttcagagtattgcggcagag
ttgaacattgatgaagcgacattgcgcagggaaaacagctggctcaatgttaatgagatc
cccaacgacagagactactctcttattgttccggtagccaatgatcagctttcggccact
cgcactcgtattgcatcggctcaaaagcccaatctacgggataacttcgctcaaaaggac
attggctttccggtattggttcgggccgaagggtacagcaatgatctgctgctgtatgaa
ataaacggcctgccgggcatcatggccggcggcaacgataatgtagagaccttggcccgc
aaggcaaagatcagcttcagcagttttctgcgctataatgaaatgtcggagcgcgacccc
attgtaccgggcgatgtttattatttggcaaaaaagggtaaacgtgccgcagtgccgttt
cacaccgttcgggagggagaatccctttggaaggtatctcaggtatacggtatacgggta
aagtacattgtaaagaacaaccgtatcgacaatcgtaatcaacgccctcaaacaggacgc
gtactgtggctcaccaaaaagcgcccgcgcaatacccccgtcgaagtagtcgatatgcca
ctggaagaatggttgcccggaaatggcaaatcacagcctcgcccgggagtgcaggaaaat
tcccgcagcgaaaccgctccggtaacgtctgctaaaattccgcaaaacccctcagaacgt
aaagtatataccccaaaaatggccgataccccaccgcccgttaagacacagcctaccgaa
acgaatgaatcgcttggggtagaaattacggatgcggcaagcgtgcccaaaaaaagtacg
tctacaaccgaccaaccgacaaagcccactaaacgagctccttctttcaatcctacagat
gatgaccgcgtggtaatcatcaacgacgacgaacccgtaaaacggcctgtcgccaataaa
cagacggttaaaacggccgccggaaagcagcagatggttgtcaaaaataccccccccgct
gcaccgaaagagcccgtggaggagcctatcgttattgccaatgaaaagcctaaacccgct
gcgccggccaagccctctccaacgaccgcaacagccaacaataagtccttgacgcacacc
gtggagccgggccaaaccttttacagcatctccaagatgtatgacgtaacggtcaatgat
attctatactggaacaatctgccgcaggatgccaaattgctgagcggacagaaattgacc
attcggcccgttggaaataccctttcgcagcaaccgaaagcggatgagtttgtaagccat
accgtagttcagggagaaacaatgttcagtatctccaaaaaatatggcgtaaaaatggac
gaaatcaaagaatggaacggtttgcccgataccggagtgaagatcgggcaacaactgaag
attaaaaaacaatga
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