Runella slithyformis: Runsl_2631
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Entry
Runsl_2631 CDS
T01553
Name
(GenBank) transcriptional regulator, LacI family
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsi03000
]
Runsl_2631
Transcription factors [BR:
rsi03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Runsl_2631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
Peripla_BP_4
LacI
HTH_23
HTH_24
MarR_2
HTH_Tnp_ISL3
HTH_7
HTH_3
HTH_31
HTH_26
HTH_38
HTH_IclR
MarR
HTH_10
HTH_11
HTH_28
Xre-like-HTH
HTH_5
Sigma70_r4
HTH_AraC
HTH_29
Fe_dep_repress
Sigma54_DBD
Sigma70_r4_2
NUMOD1
Motif
Other DBs
NCBI-ProteinID:
AEI49031
UniProt:
A0A7U4E5X9
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All DBs
Position
complement(3053529..3054542)
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AA seq
337 aa
AA seq
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MKKHQITIVDIARQLNISKSTVSRALTGHPRVSEKTKEAVLKLAGELDYQRNMLAINLMS
SQSHTIGIIVPEFVTSFFPMVIMGAQEVASKAGYNVLISQSNESYETEVANAKVMLDNRV
DGVLVSLTRETRNYDHLNVFQRKGIPIVFFNRVCDDMQVPKVVVDDYEGAFKAVEHLILT
GRKRIAHLGGPTSLHVSKKRLEGYKDALRKYSQPIDQELILDYDLNLDKVKIYIKHLLDL
PQPPDALFTINDPTAFEAMLFMKAKGIKIPEQIAVVGFSNNYGSTLIEPRLTTVAQPTHE
IGQVAAQLLLDQINSDASEWKPIYRVLKTELLVRGSS
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacaccagatcaccatcgttgacatagcgcgacagttgaatatttcaaaatca
accgtatcaagggcgctcacgggacatccgagagtgagcgaaaaaaccaaagaagctgtg
ttgaaactggccggtgaacttgactatcaacgcaatatgttggccattaacctcatgtcg
agccaaagccataccatcggcatcattgtacccgaatttgtgacgtcattttttccaatg
gtgattatgggggcgcaggaagtggcttcgaaggcggggtataatgtgctgatcagtcag
tcgaacgagagctacgaaaccgaagtagccaatgccaaagtgatgctcgataatcgggtg
gacggcgtattagtgtctttgacacgagagacgcgcaattatgaccacctcaacgttttt
cagcgcaagggaatcccaatcgtatttttcaatcgggtgtgtgacgatatgcaggtacca
aaggtagtggtcgacgattacgaaggggcttttaaagccgtagaacacctcatcctgacg
ggaagaaaacgcattgcacacttgggcgggcctacttctctgcacgtgagtaaaaagcgt
ttggaaggctataaagatgcgttgagaaaatacagtcagccaattgaccaagagctgatc
cttgattatgacctcaatctggataaagtaaaaatttacatcaaacacctgctcgacctg
ccccaaccacccgatgcgctttttaccatcaacgaccccacggcttttgaagccatgctc
tttatgaaagcaaagggcattaaaattcccgaacaaattgccgtcgtgggtttcagtaac
aactatggttctaccctcattgaaccccgcctgaccaccgtggcgcaacctacccacgaa
atcgggcaggtggcggcacagctgctgttggaccaaataaactccgatgcctccgagtgg
aagcctatttatcgggtcttgaaaaccgaattgctggtgagggggtcgagttag
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