Runella slithyformis: Runsl_5544
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Entry
Runsl_5544 CDS
T01553
Name
(GenBank) RagB/SusD domain-containing protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsi02000
]
Runsl_5544
Transporters [BR:
rsi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Runsl_5544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
TPR_12
TPR_7
TPR_2
TPR_1
TPR_19
Motif
Other DBs
NCBI-ProteinID:
AEI51834
UniProt:
A0A7U4E8U7
LinkDB
All DBs
Position
complement(6442059..6443561)
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AA seq
500 aa
AA seq
DB search
MKKITSFILLTLGFVQFSCNDDFLTTTDPTRISSDLFYQNQTQFEQALNGVYGQLQGITN
TAYLGQEFMSDNTTLDFNPLDRGGAAGWEAFEFSTVNPGNGEIATLWNSHYSTMYNINYA
LEKLEPSTIDAAAKSAIGGQLKFMRAFHYFNLVRYFGDVVLVTKTLKSPNEAFDLVRSPQ
AEVYKQIEADLKEAANLLPVTYPASGRGRVTKGAALSLLGKVYLTLKRYPEAVSTLKQVL
PLGYSLYANYKDNFDPTKKNGVESVFEVQYQGGNDLGEQSNFVYVFAPRLSQGAVTGFAN
TTPSGRNIPTNDMIAAYEPGDLRKDISLQTSYTLNGVVVPIPFINKYRYPHTITGRSDNN
WPVLRYSDVLLMLGEAINEATGPDAEALGYLNQVRKRAGLGELAGLTKDTYRTAVLNERR
VELAFENHRWFDLQRTKSPSELAAFMNAYAAKEKTSPTVSRGGIAFNALDYVYSDFEYYL
PIPAPQILINTKLTQNPGYQ
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaataacctcttttatacttttaacgcttggtttcgttcagttttcgtgtaac
gatgatttcctgacgaccaccgatccgacgcgtatcagctctgatcttttttaccaaaac
caaacccagtttgaacaggctctcaacggagtatacggacagttgcaggggattaccaat
actgcatacctggggcaggagttcatgtcagacaataccacccttgattttaatccactc
gaccgcggtggcgcggccggttgggaagcgtttgagttttcaacggttaaccccggcaac
ggtgaaattgcaactttgtggaatagtcattattctaccatgtacaacatcaattatgcc
ctggaaaaacttgaacccagtaccattgatgctgccgcaaagagtgctatcggtggtcaa
ttgaaatttatgagggcctttcattattttaacctggtgcgttatttcggcgatgtggta
ttggtgaccaaaaccctgaaaagccctaacgaagcctttgatctggtaaggtcgccccaa
gccgaagtatataagcaaattgaggccgatctcaaagaggcggctaatctgctacctgtt
acctatcctgcttcgggcagaggacgcgttacaaaaggtgccgcactgagtttgctaggc
aaagtatatttgaccttaaagcgttatcctgaagcggtttctacgttgaaacaggtgctg
cctctggggtattcgttgtacgccaattacaaagataactttgacccaaccaaaaagaac
ggtgtggagtcggtttttgaagttcagtatcagggcggcaatgacttgggagagcaaagc
aactttgtgtatgtatttgctcctcgcctgtcgcagggagccgtgacaggttttgccaat
actaccccgagcgggcgaaatatcccgaccaacgacatgatcgccgcctacgaaccggga
gatcttcgtaaggatatttccctgcagacaagttatacgctgaacggagtcgtggttcct
attcctttcattaataaatatcggtatccacacaccattacggggcgctcagataataac
tggccggtgctgaggtattctgatgtgttgttgatgctcggcgaagccatcaatgaagcc
accggaccggatgccgaagcattgggctatcttaatcaggtccgcaaacgtgcgggactt
ggcgaattggccggattgacaaaagacacttacagaacggcggtactgaatgaacgacgc
gtagagcttgcctttgagaaccaccgctggtttgacctgcagcgcaccaaatcaccttct
gaattggcagcctttatgaatgcgtatgcggctaaagaaaaaacaagtccaactgtgtca
agaggcggtattgctttcaatgcccttgattacgtgtacagtgattttgaatattatttg
ccaattccggcaccgcagattttgattaacactaaacttactcaaaatcccggttatcaa
tag
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