KEGG   Ralstonia solanacearum PSI07: RPSI07_2772Help
Entry
RPSI07_2772       CDS       T01273                                 

Definition
(GenBank) ATP dependent DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
rsl  Ralstonia solanacearum PSI07
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:rsl00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    RPSI07_2772
Enzymes [BR:rsl01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     RPSI07_2772
DNA repair and recombination proteins [BR:rsl03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     RPSI07_2772
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
2900854..2903472
Genome map
AA seq 872 aa AA seqDB search
MPAMPGPLDAYRRKRDFSQTREPAGEGHATGQRGDGALRYVIQKHDATRLHYDFRLELDG
TLKSWAIPKGPSLDPADRRLAVHVEDHPLDYADFEGHIPEDQYGGGDVIVWDRGTWRPHG
DAHAAYRAGKLKFDLDGEKLHGAWTLVRTRLPGSGRHPREQWLLIKERDDQVRPSSAYDI
TQALPASVISGRDVGDGPPAQNAVPTAMAPEPSRRTVDPPAGAVAAPLPATLEPQLATLV
GTPPASGTWDYEAKFDGYRILARIDGDSVQLFSRNGRDWTARLPRQARALPALGLRSAWL
DGEAVVVNEQGVPDFQALQNAFETAHMERIRYVLFDLPYCNGVDLRGVPLRERRALLERI
VEAAPGALDREAIAYSARLDAPPSQLLASACGMSMEGIIGKRADAPYRSGRGPTWIKLKC
GQRQAFVIGGYSAPKGSRSGFGALLLGVYADDGALRYAGRVGTGFNQASLRALHAELRGL
HTDRPPFADPPTGADARDVQWVRPERVAEIAFAEWTREGIVRQAVFQGLRDDKPARSIVR
ETAGTVGTAPRSTGHDVSARPPAARPARTVRPGAERIAGVDITHPDRIIEKASGTTKADL
ARYYASIADWLLPHLRNRPVALLRAPDGIDGEHFFQKHIGALQISGITQLDPALDPGHAS
LLTIDSVAALIGAVQMGVVEFHTWNALADRIEQPDRIVFDIDPDPALPFARVIEATQLTL
ALLDELGLRTFLKTSGGRGLHVVVPLARRTPAGWEMLKAFAQAVTQHLAHTLPDRFAAKM
GPQNRIGKTFVDYLRNNRGASTVAACSVRARPGLPVSVPIAHDELAGLHSAAQWNLRTLP
DRLAALQADPWAGYAGTRQSVTAGMRRRIGLD
NT seq 2619 nt NT seq  +upstreamnt  +downstreamnt
atgcccgccatgcccggaccgctcgacgcctaccgccgcaagcgcgacttctcgcagacc
cgggagcccgccggcgagggccacgccaccggccagcgcggcgacggcgccctgcgctac
gtgatccagaagcacgacgccacgcgcctgcactacgacttccgcctggaactggacggc
acgctcaagagctgggccatccccaagggcccgagcctggacccggccgacaggcgcctc
gccgtgcatgtggaagatcatccgctcgactatgcggacttcgaaggccatatccccgaa
gaccagtacggcggcggcgacgtgatcgtctgggaccgcggcacctggcgcccgcacggc
gacgcgcacgccgcctatcgcgccggcaagctgaagttcgatctcgacggcgagaagctg
cacggcgcgtggacactcgtgcgcacgcgcctgcccggcagcggccggcacccgagggag
caatggctgctgatcaaggagcgcgacgatcaggtcaggccatccagcgcatacgacatc
acgcaagccctgcccgccagcgtgatcagcggcagggatgtcggagacggcccgcccgcg
caaaacgcggtgccgaccgccatggcccccgaaccgtcccgccgcacagtcgacccgccc
gccggtgccgtcgcggccccgctgccggcgacgctggagccgcagctcgccacgctggtc
ggcaccccgcctgcctcgggcacatgggactacgaagccaagttcgacggttaccgcatc
ctcgcgcgcatcgacggcgacagcgtgcagctgttcagccgcaacgggcgcgactggact
gcccgcctgccccgccaggcacgcgcactgcccgcgctggggctgcgcagcgcctggctg
gacggcgaggcggtggtggtaaacgaacagggcgtgccggatttccaggcactgcagaac
gccttcgagaccgcgcacatggagcgcatccgctacgtcctgttcgacctgccgtattgc
aacggcgtggacctgcgcggcgtgccgctgcgcgagcggcgtgcgctgctggagcgcatc
gtcgaggcggcgcccggtgcgctcgaccgcgaggccatcgcttattctgcccggctggat
gcgccgcccagccagttgctggcctcagcgtgcggcatgtcgatggagggcatcatcggc
aagcgcgccgatgcaccgtaccgctcgggacgcggcccgacctggatcaagctcaagtgc
ggccagcggcaggcattcgtcatcggcggctacagcgcgcccaagggcagccgcagcggc
ttcggcgcgctgctgctgggcgtgtacgccgacgacggcgcgctgcgctacgccggacgg
gtcggcaccggattcaaccaggccagcctgcgcgcgctgcacgcggaactgcgcgggctg
cacacggaccgcccgcccttcgccgacccgcccaccggcgccgacgcgcgcgacgtgcaa
tgggtccggcccgagcgcgtggccgaaatcgccttcgccgaatggacacgggaaggcatc
gtgcggcaggcggtcttccagggcctgcgcgacgacaagccggcgcgcagcatcgtgcgt
gagaccgcaggcactgtcggcaccgcaccgcgctcaacaggacacgacgtaagcgcccgc
cctcccgcagcacgccccgcgcgcacggtgcgcccgggcgccgaacgcatcgccggagtc
gacatcacgcacccggaccgcatcatcgagaaagcgagcggcaccaccaaggccgatctc
gcccgctactacgccagcatcgcagactggctcctgccgcatctgcgcaaccggccggtg
gccctgctgcgcgcgccggacggcatcgacggcgagcacttcttccagaagcacatcggc
gcgctgcagatctccggcatcacccagctcgacccggcgctcgatcccgggcacgcgtcg
ctgctgacgatcgattcggtggcggcgctgatcggcgcggtgcagatgggcgtggtggaa
ttccacacctggaatgcgctggccgatcgcatcgagcagcccgaccgcatcgtcttcgac
atcgaccccgaccccgcgctgccgttcgcgcgcgtgatcgaggccacgcagctgacgctg
gcgctgctcgacgaactgggcctgcgcaccttcctcaagaccagcggcggccgcggcctg
catgtggtggtgccgctcgcgcggcgcacgccggccggctgggagatgctcaaagccttc
gcgcaggccgtgacacagcacctggcccacaccctcccggaccgcttcgccgccaagatg
gggccgcagaaccgcatcggcaaaacctttgtcgactacctgcgcaacaaccgcggtgcc
agcacggtggcggcctgctcggtgcgggcgcggcccggcctgccggtgtcggtgccgatc
gcacacgatgaactggccggcctgcactcggccgcgcaatggaacctgcgcacgctgccg
gatcgcctcgccgcgctgcaggccgacccctgggcaggttacgcgggcacccggcaatcc
gtgacggccgggatgcggcgccgcatcggtctcgactga

DBGET integrated database retrieval system