Ralstonia pseudosolanacearum GMI1000: RSp0275
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Entry
RSp0275 CDS
T00071
Name
(GenBank) putative glycosyl hydrolase family 18 with carbohydrate binding domain transmembrane protein
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso00520
Amino sugar and nucleotide sugar metabolism
rso01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
RSp0275
Enzymes [BR:
rso01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
RSp0275
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Gene cluster
GFIT
Motif
Pfam:
CBM_5_12
Glyco_hydro_18
Motif
Other DBs
NCBI-ProteinID:
CAD17426
UniProt:
Q8XT40
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All DBs
Position
megaplasmid:complement(356301..357506)
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AA seq
401 aa
AA seq
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MKPRVSPRFATRAVAALCLSAAAGASHAAGVYAPYIDMTLDPTPLIDQIGVRQGIQQFHL
AFVIAGDGCTPSWGGIQAIGNGASGDLLTTIAASITRYRARGGEVSVSFGGAAGTPLMKA
CTTVPALKAAYQTVIDTYQLTHVDFDIEGSVQKDTEAVARNFQAIAQLQSDFAAKGRALH
VTLTLPVLPSGLVQDGINTLNAAIANKVALDTVNVMTMDYGPADIDMGAAAISAAQGLYA
QLDTAYKVVGQVKTDAQLWRLVGVTPMIGMNDVQSETFTLPNALTVLGAAYGNGYGMVSN
WSVGRDQACPDNGAVVSPTCSGIVQRPYAFASIFRQLHGHWGTGVLRDPSYGNATGGSAP
AWSATAVYRIGQCVTYQDAKYCARWWTQGNVPNAGGVWAKS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccagggtgtccccccgcttcgccacgcgcgcagtcgccgcgctctgcctgtcc
gctgccgccggtgcctcgcatgcggcgggcgtctatgcgccgtacatcgacatgacgctc
gaccccaccccgctgatcgaccagatcggcgtgcggcagggcatccagcagttccatctc
gccttcgtgattgccggcgacgggtgcacgccgtcgtggggcggcatccaggccatcggc
aacggcgcgagcggcgatctgctgaccacgatcgccgcctcgatcacccgctaccgggcc
cggggcggcgaggtgtcggtgtcgttcggcggcgcggccggcacgccgctgatgaaggcc
tgcaccaccgtgccggcgctgaaggccgcgtaccagaccgtcatcgatacctatcagctc
acgcatgtcgatttcgatatcgaaggctccgtccagaaggacaccgaggccgtcgcgcgc
aacttccaggccatcgcgcagctgcagtcggatttcgcggcaaagggccgggcgctgcat
gtcaccctgacgctgccggtcctgccgtcggggctcgtgcaggacggcatcaacaccctc
aatgccgccatcgccaacaaggtcgcgctcgacaccgtcaacgtgatgaccatggactac
ggcccggccgacatcgacatgggcgcggcggccatcagcgcggcgcaggggctgtacgcc
caactggacaccgcctacaaggtcgtcggccaggtcaagacggatgcgcagctgtggcgg
ctggtcggcgtgacgcccatgatcggcatgaacgacgtgcagagcgagaccttcacgctc
cccaacgcgctgaccgtgctgggcgccgcgtacggcaacggctacggcatggtgtccaac
tggtcggtcggccgcgaccaggcctgcccggacaacggcgccgtggtctcgcccacctgc
tcgggcatcgtgcagcgcccctatgccttcgcctcgatcttccggcagctgcacggccat
tggggcacgggcgtgctgcgcgacccgagctacggcaatgcgaccggcggcagcgcgccc
gcctggtcggccacggcggtctaccggatcggccaatgcgtgacgtaccaggacgcgaag
tattgcgcccgctggtggacgcagggcaacgtgcccaacgccggcggcgtctgggccaag
tcgtaa
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