Ralstonia pseudosolanacearum GMI1000: RSp0845
Help
Entry
RSp0845 CDS
T00071
Name
(GenBank) putative type III effector protein
Organism
rso
Ralstonia pseudosolanacearum GMI1000
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
CAD17996
UniProt:
Q8XRI6
LinkDB
All DBs
Position
megaplasmid:complement(1067043..1071365)
Genome browser
AA seq
1440 aa
AA seq
DB search
MRPLSFPRFFSSTTTSTSRTTAPHTEATPEPAAQPPALPRARKTSNLPGPLRGLLDSRTA
KYEKTMAKLSDDTELHQALLGQRPGMNGRMTRAVHQEAKRRMDSGQWNPQPAATQAAHAP
TSPPLPEAPKTSHLPGPLRNLLDHHTAKYEKASTRFADDARLQQVLLGQAPGINHRMTRA
AYQEAKKRADHGEWNPPPAAAPHPDGTETTAAHADHAQTSAPAPTQMLALDNKPAQDANR
PPSRSSSMRSSTVHPEPHTEAPHAAPAGPVIDPDTGALNKANLRKLVNDLTHALPAVPQK
GSQTRKLSQALKDQLDAIATIAADGSRKPPHETGLAVRDAFAKAAQAASQLSRNVGGGDL
ADVYQGIAALLNEFKRTHLSASAHDVMSHYANKEAANLERKAPGIGQGKGGSNIVTSTTG
GLTYSLLPKVGYTGPDISVGAGGGKGRIYFADDDGDIDHWPSGQAYLRASLGGELGKWAA
RLTGRLDLLAGDTWFEHNDLGEMVKLVANRDANRSWMRSAGPNARKVRQALETLVNTLST
AVGRNYTESAGKPLYLNDAKIAKGFNTFKMTLLAAAIDEKLEKMGSASRFGNLVSKAYPS
TVEVLTQRLHSGGEQPLPLPPRHDVPDSVGYADGALYYRQATASVDASIGNQTHGGTNLE
AGGIFGLNLRGNVAQYFMEFGDAPHAQLDPGHQKDYRSVFKQHQLLDDACGNGTPPAQLY
LYDKMRRTLGQIDMGTPAFPFAKTEQHLYGDNACVPAQFRNAIAHASREQLLHVNEQLEQ
LKQTYLEFVASASAVLSKTDKFMPAGAGRTLSDSREAAFNLINRGIWQGRYPRKDALAHP
EAFIAKSHAALSLALGCAGTHMSVIKQQMAQRHAQDPHPQPDPNAGNEGAHPVDDNQAAI
READSTYKTVREMMDKTYLPLKNYDVRTKSPLKEAGLWQRWDTALRAQASGGAQAGLFNT
IMSRLRTKSTQVPLGDLTGTISVSDSAGQVSLSAEARLLYADHQLNPSRTGKFWQLTFTA
QGGAPITGALINLAVKAAIEKFMPNMRLEDEKFDPHEIIRQAQGLLFDITDGTSIVVKLR
QAPDVEHAAMQLQYVRVLRNKSSGPNVSLSIPTPVGAFTPSISHNDSGQSLAGEIVGTDK
SYLIMQHPAFSKVVDPFFARIAADPSNANAIAGELRQALDADPALRNRYLASPTMMADVV
KEHFDAMAELAAAAAENRPPRILNEFLRYYATEPFARAANVSAQVASHAPGSTANGGDPF
KIARSPLDERVSADTVNDLQGKREHLQGLKTIEARADYLCGAEGRPLLEAFTKIVGNMRA
INSAAFFHSNPQNIGFRSMLRDPRALARENKRIDAALNGKPESTGVLNRVRAHLQPDRIN
LKEASVTELRALAEPNPQPGQATGRRQNRQIAEAAQRELARREQRLGAALPPSGGGAPEA
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccctctcttttcccaggtttttctccagtaccaccacctccacgtcgcgtacc
acggcaccgcacacagaagccacgccggagccggcggcacagccgcccgccttgcccagg
gcccggaaaacctcgaacctgccgggcccattgcgcggcctgctcgacagccgtacggcg
aaatacgaaaaaaccatggccaagctgtcggacgataccgagttgcaccaggcgctgctg
ggccagcggcccggcatgaatggccgcatgacccgggcggtccaccaggaagcgaagagg
cgcatggatagcgggcagtggaatccgcagcccgcggcaacacaggccgcccacgcgccg
acctccccccccctcccggaggccccgaaaacctcgcacctgccgggcccattgcgcaac
ctgctcgaccaccacaccgcgaaatacgaaaaagcctcgacccggttcgcggacgatgcc
aggctgcagcaggtactgctgggccaggcgcccggcatcaaccaccgcatgacccgggcg
gcctaccaggaagcgaaaaagcgcgcggatcacggggagtggaatccgccgcccgccgcc
gccccccaccccgacggcaccgagaccaccgcagcgcatgccgaccacgcacagacatcg
gccccggcccccacgcaaatgttggcactggacaacaagccggcacaggacgccaaccgc
ccgcccagccgctcaagcagcatgcgaagcagcacggtccatcccgagccgcacaccgaa
gccccgcacgcggcgcccgccgggcccgtgatcgatcccgacaccggcgctctgaacaag
gcgaacctgcgcaagctggtgaacgatctgacccacgcgctgccggcggtgccccaaaag
ggctcccagaccaggaaactgagccaggcgctgaaagaccagctcgacgccatcgcgacg
attgcggccgacggctcgcgcaaaccgccgcacgaaaccggcctcgccgtccgcgatgcc
ttcgccaaggcggcacaggccgcgagccagctctcccgcaacgtcggcggtggcgatctg
gccgacgtgtaccaagggatcgccgccctgctcaatgagttcaagcgcacgcacctgagc
gccagcgcgcacgacgtcatgagccactacgcgaacaaggaagccgccaacctggagcgc
aaggcgcccggcatcggccagggcaagggcggctccaacatcgtgacgagcacgacgggc
ggcctgacctactccctgctgccgaaggtcggctacacgggccccgacatctccgtcggc
gccggcggcggcaagggccggatctatttcgctgacgacgacggcgatatcgaccactgg
ccctccggccaggcgtacctccgcgcctccctgggcggcgaactcggcaagtgggccgcc
aggctgaccggccggctggacttgctggccggcgacacctggttcgaacacaacgacctg
ggcgaaatggtcaagctggttgccaaccgtgacgccaaccgctcgtggatgcgatcggcc
ggccccaacgcgcgcaaggtcaggcaggcactggagacgctggtcaacaccctctccacg
gcggtcggccgcaactacacggagtcggcgggcaagccgctgtacctgaacgacgccaag
atcgccaagggtttcaacacgttcaagatgacgctgctggccgcggcgatcgacgaaaaa
ctcgaaaagatgggcagcgccagccgcttcggcaacctggtgagcaaggcctacccctcg
acggtcgaggtactgacccaacgcctccactcgggcggcgagcaaccgttgccgctgccg
ccccggcatgacgtgcccgactcggtcggctatgccgacggcgcactgtactaccgccag
gcaacggccagcgtggacgccagcatcggcaaccagacgcacggcggcaccaacctggag
gccggcggcatcttcgggctcaacctgcgcggcaacgtggcccagtacttcatggaattc
ggcgacgcgccccacgcgcagctcgacccgggccaccagaaggactaccggtcggtcttc
aagcagcaccagctgctcgacgacgcctgcggcaacggaacgcctccggcccagctgtat
ctgtatgacaagatgcgccgcacgctggggcagatcgacatgggcacaccggcgtttcct
ttcgcgaaaacggagcagcatctctatggcgacaacgcctgcgtcccggcccagttccgc
aatgccatcgcgcacgccagccgcgaacagctcctgcatgtcaatgaacagctggagcag
ctcaagcaaacctacctggaatttgtcgcgagcgcctcggccgtgctctcgaagacagac
aagttcatgcccgccggggcgggtagaacgctgagcgactcgcgtgaagccgccttcaac
ctgatcaaccgcggcatctggcaagggcgctacccgcgcaaggacgcgctggcgcacccg
gaagccttcatcgcgaaaagccatgcggcgctcagcctggcgctcggctgcgccggcacg
catatgtccgtgatcaagcagcagatggcgcagcgccacgcgcaggacccgcatcctcag
cctgacccgaacgcgggcaatgaaggcgctcatcccgtggatgacaaccaagccgccatc
agggaggccgattcgacgtacaagaccgtgcgcgaaatgatggacaagacctacctgccg
ctcaagaactacgacgtccggaccaagagcccgctgaaggaggcggggctgtggcagcgc
tgggataccgccctgcgggcccaggcctccggcggcgcgcaggccggcctgttcaacacc
atcatgagccggctgcgcaccaagtcgacccaggtgccgctgggcgacctgaccggcacc
atctcggtctccgacagcgccggccaggtctcgctgtccgccgaagcgcgcctgctgtac
gcggaccaccagctcaaccccagccgcaccggcaagttctggcagctcaccttcaccgcc
cagggcggcgcgcccatcaccggcgcgctgatcaacctggcggtcaaggcagccatcgag
aagttcatgcccaacatgcggctcgaagacgagaagttcgacccgcacgaaatcatccgc
caggcccagggcctgctgttcgacatcaccgacggcaccagcatcgtcgtcaagctgcgg
caggcgcccgacgtggagcatgccgcgatgcagctgcaatacgtgcgcgtgctgcgcaac
aagagcagcgggccgaacgtgtcactgtcgatcccgacgcccgtcggcgccttcacgccg
tcgatctcgcacaatgacagcggccagagcctcgcgggcgaaatcgtcggaacggacaag
agctacctgatcatgcagcacccggccttctccaaggtcgtggatccgttcttcgccagg
atcgcggcggaccccagcaacgccaacgccatcgcaggggaactgcggcaggccctggac
gccgaccccgcgctgcgcaatcgctatctcgccagcccgaccatgatggcggacgtggtc
aaggagcacttcgatgccatggcggaactggccgcggcggccgcggaaaaccgcccgccc
cgcatcctgaacgaattcctgcgctactacgccaccgaaccgttcgcccgcgcggccaac
gtctccgcccaggttgccagccacgcgcccggctccaccgccaacggcggggatccgttc
aagatcgcccgatcgccgctcgacgagcgtgtgtccgccgacaccgtgaacgacctgcaa
ggcaagcgcgagcacctgcagggactgaagacgatcgaggcccgcgcggattacctgtgc
ggcgcggaaggccgaccactgctggaagccttcaccaagatcgtcggcaacatgcgcgcg
atcaactccgctgccttcttccacagcaacccgcagaacatcggcttccggtcgatgctg
cgcgacccgcgtgccctggcgcgcgaaaacaagcgcatcgacgccgccctgaacggcaag
ccggagtcgaccggcgtgttgaaccgcgtgcgtgcccacctgcagccggacagaatcaac
ctcaaggaggccagcgtgaccgaactgcgcgccctggccgagccgaatccgcaaccaggc
caggcaacgggacgccggcagaatcggcagatcgcggaggcggcccaacgggaactggcg
cgccgcgagcagcggctgggggctgccctgccgcccagcggcggcggcgccccggaagcc
tga
DBGET
integrated database retrieval system
