Cereibacter sphaeroides ATCC 17025: Rsph17025_2261
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Entry
Rsph17025_2261 CDS
T00512
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rsq
Cereibacter sphaeroides ATCC 17025
Pathway
rsq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rsq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rsph17025_2261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsq03400
]
Rsph17025_2261
Enzymes [BR:
rsq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Rsph17025_2261
DNA repair and recombination proteins [BR:
rsq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Rsph17025_2261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
ABP71151
UniProt:
A4WUT7
LinkDB
All DBs
Position
2297004..2298461
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AA seq
485 aa
AA seq
DB search
MPEVVLPRLGTVAAWRTEARRLARAGVPAEAVVWRIGAGEPDLFASEPARASAPPREIRL
PREAVEVIETALCHADPERFARSYALLLRLADGSVRWGDRSDPALRRLLAQEKTVRREIH
KMHAFVRFRELPEDGPRRTFAAWFEPDHPVEEAAAPFFTRRFGDMDWAIVTPEVTSRFVN
GTLEHVLTEDRTPPPPDGTEELWRTYYANIFNPARLMVKAMQSEMPKRYWKNLPEAGLIP
DLIRGAAGRAAAMQAAAPTEPPARTAAMARQREAAAGGSARRAGAGEPAALPQAKAEAEA
CRRCGLWAHATQVVFGEGPPRARMMMVGEQPGDCEDLAGRPFVGPAGQLLDEEATAAGLD
RSTLYVTNAVKHFKFSARGKRRIHQKPDAGEVTACRWWLDLERDLVRPRLIVAMGATALA
SLTGTGAGILRRRGTVERLEDGTPVFVTVHPSYILRLPDAAAQTEERRRFRADLAAAHAL
LGTLN
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaggtggtcctgccgcggctggggacggtggccgcctggcgcaccgaggcgcgg
cggctcgcccgcgccggcgttccggccgaggccgtcgtctggcgcatcggcgcgggagag
cccgaccttttcgcaagcgagcccgcccgcgcctcggcaccgccgcgcgagatccgcctg
ccgcgcgaggcggtggaggtgatcgagaccgcgctctgccacgcggaccccgagcggttt
gcgcgcagctacgcgcttctgctgcggctggcggacgggtcggtgcggtggggagaccgc
agcgacccggccctgcgccggctgcttgcgcaggaaaagaccgtccggcgcgagatccac
aagatgcacgccttcgtccggttccgcgagttgcccgaagacggcccccgccgcaccttc
gccgcctggttcgagcccgatcacccggtcgaggaggccgcagcccccttcttcacccgc
cgcttcggggacatggactgggccatcgtcacccccgaggtgacgtcgcgcttcgtgaat
ggcacgctggaacatgtgctgaccgaggaccgcacgccgccgccgcccgatggaacggaa
gagctctggcgcacttactacgccaacatcttcaatcccgcccggctgatggtgaaggcg
atgcagtccgagatgccgaagcgttactggaagaacctgcccgaggccggcctgatcccc
gacctgatccggggcgcggccgggcgtgccgcggcgatgcaggcggccgcaccgaccgaa
ccgcccgcccgcaccgccgccatggcgcgacagagagaggccgcggccggaggctctgcc
cgcagggccggcgcgggagagcccgcggcccttccgcaggcgaaggccgaagccgaggcg
tgccggcgctgcgggctctgggcccatgcgacgcaggtcgtcttcggcgaagggccgccc
cgcgcgcggatgatgatggtgggcgagcagccgggggactgcgaggatctggccggccgg
ccgttcgtggggcccgcggggcaactccttgacgaagaggccaccgccgccgggctcgac
cgctcgacgctctatgtcaccaacgcggtcaagcacttcaagttctcggcgcggggcaag
cgccgcatccaccagaagcccgacgcgggcgaagtcaccgcctgccgctggtggctggat
ctcgagcgcgatctcgtgcggccgcggctcatcgtggcgatgggcgccacggcgctggcc
tcgctgaccgggacgggcgccggcatcctcaggcgccgcggaacggtggaacgactcgaa
gacgggacgccggtcttcgtgacggtccatccctcctacatcctgcgcctgcccgacgcc
gcggcccagacggaggagcgtcgccgcttccgtgcggatctggccgcggcccatgccctg
cttggcaccctgaactga
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integrated database retrieval system
