KEGG   Ramlibacter tataouinensis: Rta_28100
Entry
Rta_28100         CDS       T01544                                 
Symbol
sdhA
Name
(GenBank) Candidate succinate dehydrogenase flavoprotein subunit
  KO
K00239  succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
Organism
rta  Ramlibacter tataouinensis
Pathway
rta00020  Citrate cycle (TCA cycle)
rta00190  Oxidative phosphorylation
rta00650  Butanoate metabolism
rta01100  Metabolic pathways
rta01110  Biosynthesis of secondary metabolites
rta01120  Microbial metabolism in diverse environments
rta01200  Carbon metabolism
Module
rta_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rta_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rta_M00149  Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:rta00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    Rta_28100 (sdhA)
   00650 Butanoate metabolism
    Rta_28100 (sdhA)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    Rta_28100 (sdhA)
Enzymes [BR:rta01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     Rta_28100 (sdhA)
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C DAO Pyr_redox_2 Thi4 FAD_binding_3 HI0933_like GIDA Pyr_redox_3 DUF2285
Other DBs
NCBI-ProteinID: AEG93913
UniProt: F5Y573
LinkDB
Position
2993129..2994937
AA seq 602 aa
MPYSAKNITKRKFDVVIVGAGGSGMRASLQLSRAGLNVAVLTKVFPTRSHTVAAQGGIGA
SLGNMSEDNWHYHFYDTVKGSDWLGDQDAIEFMCREAPKVVYDLEHMGMPFDRNPDGTIY
QRPFGGHTANYGEKPVQRACAAADRTGHAMLHTLYQQNVKARTSFFVEWMALDLIRDAEG
DVVGVTAIEMETGDLHILEAKTTLLATGGAGRIFAASTNAFINTGDGLGMAARAGIPLED
MEFWQFHPTGVAGAGVLLTEGCRGEGAILLNSNGERFMERYAPTLKDLAPRDFVSRAMDQ
EIKEGRGCGPNKDYVLLKLDHLGAETIHKRLPSVYEIGVNFANVDITREPIPVVPTIHYQ
MGGIPTNVNGQVVVQTRESHNAVVGGLYAVGECSCVSVHGANRLGTNSLLDLLVFGRAAG
NHIAEFNEKNREHKPLPADAADRTLERLARLDGASTGEYAQDVANDIRSTMQRHAGVFRT
QASMDEGVRRIAEIRQRVGAIALKDKSMVFNTARIEALEVENLIECAQSTMVSAAARKEC
RGAHSVSDYERPSDDPVAPMGRNDAEWMKHSLWHSQTNSLTYKPVNLKPLTVESVPPKVR
TF
NT seq 1809 nt   +upstreamnt  +downstreamnt
atgccctactccgccaagaacatcaccaaacgcaagttcgacgtcgtcatcgtcggcgcc
ggcggctccggcatgcgcgcctcgctgcagctgtcgcgcgccggcctgaacgtggccgtg
ctgaccaaggtcttccccacccgctcgcacaccgtggcggcgcagggcggcatcggcgcg
tccctgggcaacatgtccgaggacaactggcactaccacttctacgacaccgtcaagggc
tcggactggctgggcgaccaggacgccatcgagttcatgtgccgcgaagcgcccaaggtc
gtgtacgacctggagcacatgggcatgccgttcgaccgcaaccccgacggcaccatctac
cagcgcccctttggcggccacactgccaactacggcgagaagccggtgcagcgcgcctgc
gccgcggccgaccgcaccggccacgccatgctgcacacgctgtaccagcagaacgtcaag
gcgcgcaccagcttcttcgtcgagtggatggcgctggacctgatccgcgacgccgagggc
gacgtggtgggcgtcaccgccatcgagatggagaccggcgacctgcacatcctggaagcc
aagaccacgctgctggccaccggcggcgccggccgcatcttcgccgcgtccaccaacgcc
ttcatcaacaccggtgacggcctgggcatggcggcgcgcgccggcatcccgctggaggac
atggagttctggcagttccaccccaccggcgtggccggcgcgggcgtgctgctgaccgag
ggctgccgcggcgaaggcgccatcctgctcaacagcaatggcgagcgcttcatggagcgc
tacgcgcccaccctcaaggatctggcgccgcgcgacttcgtctcccgcgccatggatcag
gagatcaaggaaggccggggctgcggtcccaacaaggactacgtgctgctcaagctggac
cacctgggcgccgagaccatccacaagcgcctgccctcggtctacgagatcggcgtcaac
ttcgccaacgtcgacatcacccgcgaacccatcccggtggtgcccaccatccactaccag
atgggcggcatccccaccaacgtcaacggccaggtggtggtgcagacgcgcgagagccac
aacgcggtggtgggcggcctgtacgcggtgggcgaatgctcctgcgtcagcgtgcacggc
gccaaccgcctgggcaccaactcgctgctggacctgctggtgttcggccgcgcggcaggc
aaccacatcgccgagttcaacgagaagaaccgcgagcacaagcccctgcccgccgacgcc
gccgaccgcacgctggagcggctggcacgcctggacggtgccagcaccggcgagtacgcg
caggacgtggccaacgacatccgctcgaccatgcagcggcatgcgggcgtgttccgcacc
caggccagcatggacgagggcgtgcgcaggatcgccgagatccgccagcgggtcggcgct
atcgcgctcaaggacaagtccatggtgttcaacaccgcgcgcatcgaggcactggaggtg
gagaacctgatcgagtgcgcccagtccaccatggtgtcggcggcagcgcgcaaggagtgc
cgcggcgcccattccgtcagcgactacgagcgcccgtccgacgacccggtggcaccgatg
ggccgcaacgacgccgagtggatgaagcacagcctgtggcacagccagaccaacagcctg
acctacaagccggtcaacctcaagccgctgacggtggagtcggtgccgcccaaggtgcgc
acgttctga

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