Ramlibacter tataouinensis: Rta_28100
Help
Entry
Rta_28100 CDS
T01544
Symbol
sdhA
Name
(GenBank) Candidate succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rta
Ramlibacter tataouinensis
Pathway
rta00020
Citrate cycle (TCA cycle)
rta00190
Oxidative phosphorylation
rta00650
Butanoate metabolism
rta01100
Metabolic pathways
rta01110
Biosynthesis of secondary metabolites
rta01120
Microbial metabolism in diverse environments
rta01200
Carbon metabolism
Module
rta_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rta_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rta_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Rta_28100 (sdhA)
00650 Butanoate metabolism
Rta_28100 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
Rta_28100 (sdhA)
Enzymes [BR:
rta01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Rta_28100 (sdhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
Thi4
FAD_binding_3
HI0933_like
GIDA
Pyr_redox_3
DUF2285
Motif
Other DBs
NCBI-ProteinID:
AEG93913
UniProt:
F5Y573
LinkDB
All DBs
Position
2993129..2994937
Genome browser
AA seq
602 aa
AA seq
DB search
MPYSAKNITKRKFDVVIVGAGGSGMRASLQLSRAGLNVAVLTKVFPTRSHTVAAQGGIGA
SLGNMSEDNWHYHFYDTVKGSDWLGDQDAIEFMCREAPKVVYDLEHMGMPFDRNPDGTIY
QRPFGGHTANYGEKPVQRACAAADRTGHAMLHTLYQQNVKARTSFFVEWMALDLIRDAEG
DVVGVTAIEMETGDLHILEAKTTLLATGGAGRIFAASTNAFINTGDGLGMAARAGIPLED
MEFWQFHPTGVAGAGVLLTEGCRGEGAILLNSNGERFMERYAPTLKDLAPRDFVSRAMDQ
EIKEGRGCGPNKDYVLLKLDHLGAETIHKRLPSVYEIGVNFANVDITREPIPVVPTIHYQ
MGGIPTNVNGQVVVQTRESHNAVVGGLYAVGECSCVSVHGANRLGTNSLLDLLVFGRAAG
NHIAEFNEKNREHKPLPADAADRTLERLARLDGASTGEYAQDVANDIRSTMQRHAGVFRT
QASMDEGVRRIAEIRQRVGAIALKDKSMVFNTARIEALEVENLIECAQSTMVSAAARKEC
RGAHSVSDYERPSDDPVAPMGRNDAEWMKHSLWHSQTNSLTYKPVNLKPLTVESVPPKVR
TF
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgccctactccgccaagaacatcaccaaacgcaagttcgacgtcgtcatcgtcggcgcc
ggcggctccggcatgcgcgcctcgctgcagctgtcgcgcgccggcctgaacgtggccgtg
ctgaccaaggtcttccccacccgctcgcacaccgtggcggcgcagggcggcatcggcgcg
tccctgggcaacatgtccgaggacaactggcactaccacttctacgacaccgtcaagggc
tcggactggctgggcgaccaggacgccatcgagttcatgtgccgcgaagcgcccaaggtc
gtgtacgacctggagcacatgggcatgccgttcgaccgcaaccccgacggcaccatctac
cagcgcccctttggcggccacactgccaactacggcgagaagccggtgcagcgcgcctgc
gccgcggccgaccgcaccggccacgccatgctgcacacgctgtaccagcagaacgtcaag
gcgcgcaccagcttcttcgtcgagtggatggcgctggacctgatccgcgacgccgagggc
gacgtggtgggcgtcaccgccatcgagatggagaccggcgacctgcacatcctggaagcc
aagaccacgctgctggccaccggcggcgccggccgcatcttcgccgcgtccaccaacgcc
ttcatcaacaccggtgacggcctgggcatggcggcgcgcgccggcatcccgctggaggac
atggagttctggcagttccaccccaccggcgtggccggcgcgggcgtgctgctgaccgag
ggctgccgcggcgaaggcgccatcctgctcaacagcaatggcgagcgcttcatggagcgc
tacgcgcccaccctcaaggatctggcgccgcgcgacttcgtctcccgcgccatggatcag
gagatcaaggaaggccggggctgcggtcccaacaaggactacgtgctgctcaagctggac
cacctgggcgccgagaccatccacaagcgcctgccctcggtctacgagatcggcgtcaac
ttcgccaacgtcgacatcacccgcgaacccatcccggtggtgcccaccatccactaccag
atgggcggcatccccaccaacgtcaacggccaggtggtggtgcagacgcgcgagagccac
aacgcggtggtgggcggcctgtacgcggtgggcgaatgctcctgcgtcagcgtgcacggc
gccaaccgcctgggcaccaactcgctgctggacctgctggtgttcggccgcgcggcaggc
aaccacatcgccgagttcaacgagaagaaccgcgagcacaagcccctgcccgccgacgcc
gccgaccgcacgctggagcggctggcacgcctggacggtgccagcaccggcgagtacgcg
caggacgtggccaacgacatccgctcgaccatgcagcggcatgcgggcgtgttccgcacc
caggccagcatggacgagggcgtgcgcaggatcgccgagatccgccagcgggtcggcgct
atcgcgctcaaggacaagtccatggtgttcaacaccgcgcgcatcgaggcactggaggtg
gagaacctgatcgagtgcgcccagtccaccatggtgtcggcggcagcgcgcaaggagtgc
cgcggcgcccattccgtcagcgactacgagcgcccgtccgacgacccggtggcaccgatg
ggccgcaacgacgccgagtggatgaagcacagcctgtggcacagccagaccaacagcctg
acctacaagccggtcaacctcaagccgctgacggtggagtcggtgccgcccaaggtgcgc
acgttctga
DBGET
integrated database retrieval system