Ramlibacter tataouinensis: Rta_37530
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Entry
Rta_37530 CDS
T01544
Symbol
topA
Name
(GenBank) Candidate type IA DNA topoisomerase
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
rta
Ramlibacter tataouinensis
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rta03032
]
Rta_37530 (topA)
Enzymes [BR:
rta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Rta_37530 (topA)
DNA replication proteins [BR:
rta03032
]
Prokaryotic type
DNA Topoisomerases
Rta_37530 (topA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
SWIB
Toprim
PADR1_Zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
AEG94868
UniProt:
F5Y2Y8
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All DBs
Position
3994895..3997864
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AA seq
989 aa
AA seq
DB search
MSKTLIIAEKPSVAQDIVRALTPVAGKFDKHDEHFENDRYVVTSAVGHLVEIQAPEEFDV
KRGKWSFAHLPVIPPYFDLKPVDKTKGRLNAVVKLAKRKDVTELVNACDAGREGELIFRL
IEQFAGGGNPLGKPVRRLWLQSMTPQAIRDGFEQLRTDRQMEGLASAARSRSEADWLVGI
NGTRAMTAFNSRDGGFFLTTVGRVQTPTLAVVVEREEQIRRFVSRDYWEIHASFLAEAGE
YPGKWFDPKWKKNPDDAEQKADRVWTLQEAQAIADAVRGKAATVTEESKPTTQASPLLFD
LTSLQREANGRFGYSAKTTLALAQSLYERHKALTYPRTDSRALPEDYLGTVKQTMQMLAA
SGMRHLAPFAQQAIDGNYVKPTRRVFDNSKVSDHFAIIPTLQAPSGLSDAEQKLYDLVVR
RFLSIFFPSAEHLVTTRINQVVGHHFKTEGKVLVKPGWLAIWGKEADVEGDENSKTLVPV
KPGEMVRTESVEARGLKTRPPARYSEATLLGAMEGAGKLVEDDELREAMQDKGLGTPATR
AAIIEGLINERYMFREGRELIPTAKAFQLMTLLRGLGVEELSRPELTGEWEYKLAQMERG
QLSRDAFMQEIAEMTKHIVKKAKEYDRDTVPGDYATLKTPCPNCGGVVKENYRRYSCVGR
KGDGSDACGFSFTKIPAGRAFELHEVEQFLRDKRIGPLEGFRSKAGWPFTAEIALKYGEE
EKNWKLEFDFGDEQDPSETGELVDFGAQQPLGPCPKCAARVFEFGKNYVCERSVPTPQQP
TPSCDFKTGQIILQQPVEREQMQKLLATGRTDLLDKFVSMRTRRPFKARLAWDAEAGKVN
FEFEPRESKFPPRKGAGAARPATGKTAPRKAAVGRKAGAAIPADKGTAAAKKAAGAKPVA
AAKKAAAPKAPRKTGPGLTPSPQLAAVVGAEPVARTEVIKKLWDYIKANGLQDAANKRAI
NADAKLAAVFGKPQVTMFELAGIVGKHLS
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagacactcatcattgccgagaagccttccgtcgcgcaggacatcgtgcgcgcc
ctcacgcccgtggccggcaagttcgacaagcacgacgagcacttcgagaacgaccgctac
gtggtcaccagcgccgtcggccacctggtggagatccaggcgcccgaggagttcgacgtc
aagcgcggcaagtggagcttcgcccacctgccggtcatcccgccgtacttcgacttgaag
ccggtggacaagaccaagggccggctcaacgccgtggtcaagctggccaagcgcaaggac
gtgaccgaactggtcaacgcctgcgacgcgggccgcgagggcgagctcatcttccggttg
atcgagcagttcgccggcggcggcaatccgctgggcaagccggtgcggcggctgtggctg
cagtccatgaccccccaggccatccgcgacggcttcgagcagctgcgcaccgaccgccag
atggagggcctggcctcggccgcgcgctcgcgctccgaggccgactggctggtgggcatc
aacggcacgcgcgccatgacggccttcaactcgcgcgacggcggcttcttcctgaccacc
gtgggccgggtgcagacgcccacgctggccgtggtggtcgagcgcgaggagcagatccgc
aggttcgtcagccgcgactactgggagatccacgccagcttcctggccgaggccggcgag
tacccgggcaagtggttcgaccccaagtggaaaaagaaccccgacgacgccgagcagaag
gccgaccgggtctggacgctgcaggaggcgcaggccatcgccgacgcggtgcgcggcaaa
gccgccaccgtcaccgaggaatccaagcccaccacccaggcttcgccgctgctgttcgac
ctgacctcgctgcagcgcgaggccaacggccgcttcggctactcggccaagaccacgctg
gcactggcgcagtcgctgtacgagcgccacaaggcgctgacctacccgcggaccgactcg
cgcgccctgcccgaggactacctgggcaccgtcaagcagaccatgcagatgctggccgcc
agcggcatgcgccacctggccccgttcgcccagcaggccatcgacggcaactacgtcaag
cccaccaggcgcgtcttcgacaacagcaaggtcagcgaccacttcgccatcatccccacg
ctgcaggcgcccagcgggctgtcggatgccgagcagaagctgtacgacctggtggtgcgg
cgcttcctgtccatcttcttccccagcgccgagcacctggtgaccacccgcatcaaccag
gtggtgggccaccacttcaagaccgagggcaaggtgctggtcaagccgggctggctggcc
atctggggcaaggaagccgacgtggagggcgacgagaacagcaagacgctggtgccggtg
aagcccggcgagatggtccgcaccgagtcggtggaggccaggggcctgaagacccggccg
cccgcgcgctactcggaagccacgctgctgggcgcgatggagggagccggcaagctggtg
gaggacgacgagctgcgcgaggccatgcaggacaagggcctgggcacgccggccacccgg
gccgccatcatcgagggcctgatcaacgagaggtacatgttccgcgagggccgcgagctg
atccccacggccaaggccttccagctgatgacgctgctgcgcgggctgggcgtggaggag
ctctcccgccccgagctgaccggcgagtgggagtacaagctggcgcagatggagcgcggc
cagttgagccgcgacgccttcatgcaggagatcgccgagatgacgaagcacatcgtcaag
aaggccaaggagtacgaccgcgacaccgtcccgggcgattacgccacgctgaagacgccc
tgccccaactgcggcggcgtcgtcaaggagaactaccggcgctacagctgcgtcggccgc
aagggcgacggcagcgacgcctgcggcttctcgttcaccaagatcccggccggccgggct
ttcgagctgcacgaggtcgagcagttcctgcgcgacaagcgcatcggcccgctggagggc
ttccgctccaaggcgggctggccgttcaccgccgagatcgcgctcaagtacggcgaggaa
gagaagaactggaagctggagttcgacttcggcgacgagcaggacccgagcgagaccggc
gagctggtggacttcggcgcgcagcagccgctgggcccctgccccaaatgcgccgcccgg
gtgttcgagttcggcaagaactacgtctgcgagcggtccgtgcccacgccgcagcagccc
acccccagctgcgacttcaagaccggccagatcatcctgcagcagcccgtcgagcgcgag
cagatgcaaaagctgctggccaccggccggaccgacctgctggacaagttcgtctccatg
cgcacgcgccgccccttcaaggcgcgcctggcctgggacgccgaagccggcaaggtgaat
ttcgagttcgagccgcgcgagagcaagttccccccgcgcaagggcgcgggcgcggcgcgg
ccggcaacgggcaagaccgcgccgcgcaaagcagctgtcggcaggaaggcaggcgcggcc
attcctgccgacaagggcactgctgccgccaagaaggccgccggcgcgaagcctgtggct
gccgccaagaaagccgcggcacccaaggcaccccgcaagaccggtcccggcctcacgccc
agcccgcagctggccgccgtggtgggcgccgagccggtggcccgcaccgaggtcatcaag
aagctgtgggactacatcaaggccaacggcctgcaggatgccgccaacaagcgcgccatc
aacgccgacgccaagctggccgcggtgttcggcaagccacaggtgaccatgttcgagctg
gcgggcatcgtcggcaagcacctgtcgtag
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