Rathayibacter tritici: A6122_1842
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Entry
A6122_1842 CDS
T04388
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rtn
Rathayibacter tritici
Pathway
rtn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rtn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A6122_1842
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtn02000
]
A6122_1842
Transporters [BR:
rtn02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
A6122_1842
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Paralog
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GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_11
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
AND16970
UniProt:
A0A160KT64
LinkDB
All DBs
Position
complement(2115197..2116339)
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AA seq
380 aa
AA seq
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MTIQRLSRTAAVTAAGTALVLALSACSGGVTASTEGSSAAAASATSAADLGGLDALVEAA
KAEGQLSVIALSDTWANYGKLISGFENTYGITVNAADPDASSAEEISTAKNLAGQDTAPD
VFDLGPAIALANTDMFARYKVEAWDDIPEGNKEQSGLWVNDYTGLMSIGYDAAAVPAPTS
LQDLLGSGYRGSVAINGDPTQAGAAAAAVELAALQTGGSADDVQPGIDFFHTLNDAGNFL
PLDPTEATIASGETPVVFDWSYNNLAAGTANAGSREWSTTVLPGAAVGSYYSQAINAHAP
HPAAARLWQEYLYSDAAQNLYLAAGAYPVRLAAMTEAGTLDQGALAAVGAAPSDLVQFTE
EQTKAASSLLAEKWAAAIQG
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
ttgaccattcagcgactctcgcgcaccgccgccgtcaccgcggccggcaccgctctcgtc
ctcgcgctctctgcctgttccggcggcgtgaccgcctccacggaaggctccagcgcggcg
gccgcgtccgccacgtccgccgccgacctgggcggactcgacgccctggtcgaggccgcg
aaggccgaggggcagctcagcgtgatcgccctgtccgacacctgggcgaactacggcaag
ctgatcagcggcttcgagaacacgtacggcatcaccgtgaacgccgccgaccccgacgcc
tcctcggccgaggagatcagcacggcgaagaacctcgccggtcaggacaccgctcctgac
gtgttcgacctgggaccggccatcgcactggccaacaccgacatgttcgcccggtacaag
gtcgaagcgtgggacgacattccggaggggaacaaggagcagtcgggcctctgggtgaac
gactacaccgggctgatgtcgatcggctacgacgcggcggccgtgcccgcgccgacgtcg
ctccaggacctcctcggctccggctaccgcggctcggtcgcgatcaacggcgacccgacc
caggccggcgccgccgccgccgcggtagagctcgcggccctccagaccggcggatccgcc
gacgacgtccaacccgggatcgacttcttccacacgctcaacgacgccgggaacttccta
ccgctggacccgaccgaggccacgatcgcctccggtgaaaccccggtggtcttcgactgg
agctacaacaatctcgcggcgggtacggcgaatgcgggcagtcgtgagtggagcacgacc
gttctgccgggcgcggctgtcggcagctactacagccaggcgatcaacgcccacgccccg
catcccgcggccgcacggctctggcaggagtacctctactccgatgcggcgcagaacctc
tacctcgctgccggtgcgtacccggtgcgcctggccgcgatgactgaggccggcacgctc
gaccagggcgcgctcgccgccgtcggcgctgctccctccgacctggtccagttcaccgag
gagcagacgaaggccgcctcgtcgctcctggccgagaagtgggctgcggcgatccaggga
tga
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