Ruminococcus torques: RTO_14400 Help Entry RTO_14400         CDS       T02606                                  Name (GenBank) RNA polymerase sigma-54 factor   KO K03092   RNA polymerase sigma-54 factor Organism rto  Ruminococcus torques Pathway rto02020   Two-component system rto02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:rto00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     RTO_14400  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     RTO_14400  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:rto03021]     RTO_14400 Transcription machinery [BR:rto03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      RTO_14400 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_CBD Sigma54_DBD Sigma54_AID HTH_Tnp_ISL3 Fe_dep_repress HTH_Crp_2 HTH_32 Aldedh HTH_12 HTH_23 HTH_37 Motif Other DBs NCBI-ProteinID:  CBL26056 UniProt:  D4M494 LinkDB All DBs Position 1481855..1483192 Genome browser AA seq 445 aa AA seqDB search MGLELKVEQKQRVYQKQIEQARILQMNAQELAVCIQEAALENPLIELEEMMDVPIEELVK KDVRETDETEAEVSEDTDWRYTGGHQSPEDWWTPQGGKSESLVDMIHQQLLTMSIGEKEK EIVEKLAGALDSRGYLEIPVKKLAKYIPCSVQELRSALEILKSLEPAGIGATDLKECLIL QLRRQKDSRLAVTLVKNYLEDLPKHRISAIAKELGENEDAVKDAFARIRTLNPKPGSIFG EGTTVLYVIPDIIVSEEHGEYTAALNEAVYRKLRLNESYVKLKDSEESEVREYIIQKQAQ AGWLKTCIEQRSHTLQRIADILIDFQRTFLETGKDMKPLRQKDVAQIMEVHESTVSRAVK GKYLQCGRGVYALSDFMPKGMEEVSSDSVKQMLKKIIQNEDKKKPLSDQKLVKKLEEEGV QISRRTVAKYRMQMEIPDASGRKAE NT seq 1338 nt NT seq  +upstreamnt  +downstreamnt atgggactggaactgaaggttgagcagaaacaaagggtatatcagaagcagattgagcag gcacgcatcctgcaaatgaatgcacaggaactcgctgtgtgtattcaggaggcagcattg gagaatccgttgattgaactggaagaaatgatggatgtgccgatagaagaactggtgaag aaggatgtgcgagaaactgatgaaacagaagcagaggtatcggaggataccgactggaga tataccggcgggcatcagtcgccagaagactggtggactccacagggaggaaaatcggaa agtcttgttgatatgatacatcaacagctgctgacgatgtcaattggggaaaaagaaaag gaaattgtggaaaagttggcgggagcgttggacagcagaggatatctggagattccggtg aaaaaactggcaaaatatataccatgttcggtgcaggaacttcggagtgcattagagata cttaaatcattggaaccggcaggaatcggtgcgacagatttgaaggaatgtctgattctg cagttgagacggcagaaagactcccggcttgcggttacattggtcaaaaattatctggaa gacttgccgaaacatagaatttcagcaattgcaaaggaactgggagagaacgaggatgcg gtaaaagatgcatttgccagaatcaggaccttgaacccaaaaccgggaagtattttcggg gaaggaacaacggtgctctatgtgataccagatattattgtgtcggaagaacatggagaa tacacagcggcattgaacgaggctgtgtaccggaaactgcggctgaatgaatcctatgtg aagctgaaggattctgaggaatcagaggtaagagaatatattattcaaaaacaggcgcag gcagggtggctgaaaacatgtattgaacagagaagtcatacactgcagagaatcgcagat atattgatagatttccaaaggacatttttagagacgggaaaggatatgaaaccgctcaga cagaaggacgttgcacagatcatggaagtgcatgaatcgacggtcagcagggctgtaaaa ggaaaatatctacagtgtggcagaggtgtatacgcactgtcggattttatgccgaaagga atggaagaagtcagcagtgattctgtaaagcagatgctgaagaaaatcattcaaaatgaa gataagaaaaaaccactgagtgatcagaaactggtaaagaaactggaagaagagggtgta caaatatcaagaagaacagtggcaaaatacaggatgcagatggaaattccagatgcatcc ggcagaaaagcagagtga

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