Rathayibacter toxicus 70137: TI83_04920
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Entry
TI83_04920 CDS
T03670
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
rtx
Rathayibacter toxicus 70137
Pathway
rtx00061
Fatty acid biosynthesis
rtx00071
Fatty acid degradation
rtx01100
Metabolic pathways
rtx01212
Fatty acid metabolism
rtx02024
Quorum sensing
Module
rtx_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rtx00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
TI83_04920
00071 Fatty acid degradation
TI83_04920
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TI83_04920
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rtx01004
]
TI83_04920
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtx04147
]
TI83_04920
Enzymes [BR:
rtx01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
TI83_04920
Lipid biosynthesis proteins [BR:
rtx01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
TI83_04920
Exosome [BR:
rtx04147
]
Exosomal proteins
Exosomal proteins of breast milk
TI83_04920
Exosomal proteins of breast cancer cells
TI83_04920
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-ProteinID:
AJM77465
UniProt:
A0A0C5BGY7
LinkDB
All DBs
Position
complement(1085561..1087384)
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AA seq
607 aa
AA seq
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MDHSDSPLAVTADPQANTTALLLNRVRETPDRPLFAVPTGSGWRDVTAREFLDQVIALAK
GFVAAGIEPSEKIGLVCATRYEWTLIDFAVWFAGGVLVPVYETSSPAQIQWNLVDSGATA
VIMETPEQFARFDEVRAELPDVRDAWQIGLGDLDKLVARGTDVSDDEIERRRSLATGSDI
ATIIYTSGSTGQPKGCVIQHANFVELTRNAAVALTTVIHEPGASILLFITTSHVFARFIS
ILCVHGGVKVGHQANIKKLLPALASFKPTFLLAVPGVFEKVYNSAEQKAEAHGRGKIFRR
AADVAVAHSRAVQAGSVPFILHLQFLLFNRLIYSKLRAAMGGRVRYAVSGSAPLGERLGH
FFHSLGITILEGYGLTETTAPVTVNRAEHFVIGTVGTALPGVSVRIAADGEIQVRGINVF
GGYWNNEQATAEAFNGDWFRTGDLGTLDDDGFVRITGRTKEIIVTAGGKNVAPAALEDPL
RANPLIGQAVVVGDQRPFIAALITLDSEMLPTWLDNNGQDPSLSLAEAVNNPAVLAEVQR
AVTAANERVSRAESIRKFVILPTEFTEASGHLTPKLSIKRTAVLADFADAISALYWRDPL
TEGISLY
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
gtggatcactctgactccccgctcgcggtaaccgccgacccacaggcgaataccactgcc
ctgctgcttaaccgagtacgcgagactcctgaccggccactcttcgctgtgcctacaggc
tccggctggcgcgacgtcacggcacgtgaattcctcgaccaggtcatcgcgctcgcgaag
ggttttgttgcagccggaatcgagccgagtgaaaaaatcggattggtgtgcgcgacccgc
tatgagtggacgctgattgacttcgcggtctggttcgcaggcggagtcctcgtgccggtg
tatgaaacctcttctccggcgcagatacagtggaacctcgtcgactccggcgcgacggcg
gtgatcatggaaacccccgaacagttcgcccgttttgatgaggtacgtgctgagctaccc
gatgttcgcgacgcctggcagatcggcctcggtgacctcgataagctcgtcgcccgagga
accgacgtctccgacgacgagatcgagcgtcgccgatcactcgctaccgggtctgacatc
gccaccattatttacacctccggttcaaccgggcagccgaagggctgcgtcatccaacac
gccaacttcgtcgagctgacccggaatgccgcagtcgcgctgaccacggtgattcacgaa
ccgggggcatcgatactgctattcatcaccacctcgcacgtctttgcacgctttatctcc
attctttgcgtgcacggcggcgtcaaagtggggcaccaggccaacataaaaaaattgttg
cccgctctcgcctcattcaagccgacattcttactagcagtaccaggagtgtttgaaaag
gtctacaactcggccgagcaaaaggcagaagcacacgggagaggaaagatttttcgccgg
gcagctgacgtcgcggtcgcgcattctcgtgccgtccaggcaggttcggtaccctttatt
ctgcatctgcaattcctactttttaaccgactcatctactcgaaactgcgggctgccatg
ggaggcagagtccgctatgcggtatcgggatcagcgccattgggcgaacggctcggacat
tttttccatagcctcggcatcacgatccttgaaggctacggactcacggagaccactgct
ccagtaaccgtcaaccgcgccgaacatttcgtaataggcactgtcggcactgcccttccc
ggggtatcggttcgcattgccgccgatggtgagatccaggtgcgcggtatcaatgtcttc
ggcggctattggaataacgaacaggcaacagcggaggctttcaacggcgactggttccgg
accggcgatctcggaacgctcgacgacgacggtttcgtccgtatcacgggacgcacgaaa
gaaattattgtcaccgccggcgggaagaatgtcgcgcccgcagccctggaggatccgctg
cgcgcaaatccgttgatcgggcaggcggttgttgtcggtgatcagcggcccttcatcgcg
gcactcatcacgctagatagcgagatgctgcccacctggctcgacaataacggtcaggac
ccctccctctcccttgcggaagcggtgaacaatccggccgtcttggcggaggtgcagcgc
gccgtcaccgcggccaatgagcgcgtttcgcgagcggagtcgatccgcaagttcgtcatt
ttgcccaccgagttcacagaggcgagcggtcacctcactccgaagctgagcatcaagcgc
accgccgtgctcgccgactttgccgatgccatttcggcgctctactggagagatcccctc
actgaggggatcagtctttactaa
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