KEGG   Rickettsia typhi Wilmington: RT0317
Entry
RT0317            CDS       T00193                                 
Symbol
topA
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
rty  Rickettsia typhi Wilmington
Brite
KEGG Orthology (KO) [BR:rty00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rty03032]
    RT0317 (topA)
   03400 DNA repair and recombination proteins [BR:rty03400]
    RT0317 (topA)
Enzymes [BR:rty01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     RT0317 (topA)
DNA replication proteins [BR:rty03032]
 Prokaryotic type
  DNA Topoisomerases
   RT0317 (topA)
DNA repair and recombination proteins [BR:rty03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      RT0317 (topA)
SSDB
Motif
Pfam: Topoisom_bac Toprim Toprim_C_rpt zf-C4_Topoisom HTH_25
Other DBs
NCBI-ProteinID: AAU03797
UniProt: Q68X45
LinkDB
Position
complement(400985..403324)
AA seq 779 aa
MKLVIVESPAKAKTINKYLGDEFKVIASFGHIRDLPSKKGSVLPDKNFAMEYDISDKASK
YVDAIVKYARKAEAVYLATDPDREGESISWHVAEVIKEKNKVESDDFFKRVAFNEITKKA
IIHAVENPRKLDTNLVNAQQARRALDYLVGFTLSPLLWRKLPGCKSAGRVQSVALRLICD
REDEIERFKAEEYWDISLKMQNSNNELFTAKLTHVNDQKLKKFSIINEKEAKDLTRKLKL
QKFYVEKIEKKQQKRQPQPPFITSSLQQEAARKLGFSAKKTMQIAQKLYEGVDIGKETIG
LITYMRTDGVTLSNDAIADIRKLIDKNYGNKYLPINPRIYQSKVKNAQEAHEAIRPTNIT
YTPDNLKQKLEKDYYKLYELIWQRTIACQMENVIMDLVIANLASENKEYLAKANGSIIAF
DGFYKVYRESLDDEDEEDNKMLPPLKAQEHIKTKEVIPNKHFTEPPPRYSEASLVKKLEE
LGIGRPSTYASILSVLQDRKYVTLEKKRFIPEELGRLVTVFLVGFFKKYVEYDFTAGLEN
ELDEIAAGKLEWKTSLNNFWSGFNNNIESVNEQKITEIINYLQKALDYHLFGENKESKVC
PSCKTGQLSLKLGKFGAFLACSNYPECTFKKSIVSGNDNNEDEGNLSTILNDNKILGTDK
DGVEIYLKTGPYGPYIQLGEQCGKVKPKRTPVPTNLKQSEITLEVALKLLSLPLKIGIHK
DSGEEIIIGYSKFGPYIKYMCKFISVPKKYDFLNLNLDDAIKLIENNKAKLEKKHRSMV
NT seq 2340 nt   +upstreamnt  +downstreamnt
atgaaattagtaatagtagaatcaccagcaaaggcaaaaacaataaataaatatttaggc
gatgagtttaaggttattgcatcatttggtcatattagagatttaccatctaaaaaaggt
tcggtattgcctgataaaaattttgcaatggaatatgatatttcagataaagccagtaaa
tatgtagatgcaatagttaaatatgcgagaaaagccgaggcagtatatcttgcaactgat
cctgatcgtgaaggcgaatctatctcatggcatgttgcagaggtaataaaagaaaaaaat
aaggttgaatcagatgatttttttaaaagagtagcatttaatgagattactaaaaaagca
attattcatgcagttgaaaaccctaggaaactagatactaacttagtcaatgcacagcaa
gcaagaagggctttagactatttagtcggatttaccctttcacctcttttatggcgtaaa
ttacctggctgtaaatcagcaggacgcgtacagtctgtagctctgcgattaatatgtgat
cgagaagatgaaatagagcgtttcaaagcagaagaatattgggatattagccttaaaatg
caaaatagtaataacgaactatttactgctaaattgactcatgtaaacgatcaaaagtta
aaaaaattctcaattattaatgaaaaagaagccaaagatttaacacggaaattaaagtta
caaaaattttatgttgaaaagatagaaaagaaacaacaaaaacgtcaaccacaaccgcct
tttattacttcatcactacaacaagaagcagcaagaaaactaggttttagtgctaaaaag
acgatgcaaatagcacaaaaactttatgaaggtgttgatataggtaaagaaactatagga
ctgattacttatatgagaaccgatggcgttacattatcaaatgatgcaatagcagatata
cgtaagttaatcgataaaaattatggcaataaatatttaccaattaaccctagaatttat
caatccaaagtaaaaaatgctcaagaagctcatgaagcaataagaccaacaaatattact
tatactcctgataatttaaaacaaaagctagaaaaagattattataagctttatgaacta
atttggcaaagaactatagcctgccaaatggaaaatgttataatggatttagtaattgca
aatttagcttcagaaaataaagaatatttagcaaaagcaaatgggtcaattatagcattt
gatggtttttataaggtttatcgtgaaagtctagatgatgaagatgaagaagataataaa
atgctaccacctttaaaagcacaagaacatattaaaactaaagaagttattccaaataag
cattttaccgagccacctccaagatattcagaagcaagtttagtcaagaaacttgaagag
cttggtatcggtcgtccttcaacttatgctagtattttatcagttttacaagatcgaaaa
tatgttacacttgagaaaaaacgttttatacctgaagagcttggacgtttagtaacagta
tttttagttggtttttttaaaaaatatgtagaatatgattttactgctggtcttgaaaat
gaattagacgaaatagctgcaggcaaacttgaatggaaaacttctttaaataatttttgg
agtggttttaataataatattgaatcggtaaatgaacaaaaaataaccgaaattattaac
tatttacagaaagctcttgattatcatctatttggtgagaataaagaatctaaagtatgt
ccatcatgcaaaactggtcagcttagcttaaagcttggtaaatttggagcatttttagca
tgtagtaattatcctgaatgtacttttaaaaaatctattgtgagcggtaacgataataac
gaggatgaaggcaatctttcaactattcttaatgataataaaattttaggtactgataaa
gatggagtggaaatatatcttaaaacaggaccttatggaccttatattcagcttggcgaa
caatgcggcaaagtaaagccaaaacgtactcctgtacctactaacttaaaacaaagtgaa
atcacacttgaagttgcattaaaactcctaagcttaccactgaaaatcggtattcataag
gatagcggagaggaaattataataggatacagtaaattcggcccctacataaaatatatg
tgtaaatttatttcggtgccaaaaaaatatgattttctaaatttaaacttagatgatgca
attaagctaattgaaaacaataaagcgaaattagaaaagaaacatagatcaatggtttaa

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