Ruminococcus sp. SR1/5: CK1_38700
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Entry
CK1_38700 CDS
T02601
Name
(GenBank) dipeptidase, putative
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rum
Ruminococcus sp. SR1/5
Pathway
rum00300
Lysine biosynthesis
rum01100
Metabolic pathways
rum01120
Microbial metabolism in diverse environments
rum01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CK1_38700
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rum01002
]
CK1_38700
Enzymes [BR:
rum01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
CK1_38700
Peptidases and inhibitors [BR:
rum01002
]
Metallo peptidases
Family M20
CK1_38700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
CBL21555
LinkDB
All DBs
Position
3407137..3408495
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AA seq
452 aa
AA seq
DB search
MDIKEEIHALSEEMLTNLGRLVAIDSQLGTPSEGKPFGEGPAKALKEGLKIAEELGFKTV
NLDNYCGYAEMGEGDEIVGIAGHLDIVPVGGDWTYDPFSLTREGDHVYGRGTTDDKGPIL
EALYAMKLLRDHGVKLNKRVRLIMGCNEETGSRCMAHYNQVAEELSCGFTPDASFPCIHG
EKGQLAMIACSKNTRIISMNGGFVSNAMCDTCTTVVPAEDGLKEKLESALSQTKLQEYKV
TEDNGELTIYAKGVPAHASTPHLGVNAAGVTFECLANAGFEDDFVEFYNSHIGTACDGSG
IGLKFADEYGDLTLCNGIVKTENGVISCTIDIRVPVTLNETDIRKMCQDRLEDKNGRIEI
KNIVAPLFFPRESPLVNALYKAYTDVTGDTEHKPMVIGGGTYAKSLKNIIAFGPEKEGID
YRIHGADEFILVSGMEEAVLIYMEAIKNMLAI
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggatattaaagaggaaatccacgcattatcagaagaaatgctcacaaaccttggcaga
ctggttgccattgactcccagctcggtaccccttccgagggaaagccattcggtgagggc
cctgcaaaagctctgaaagaaggactgaagattgccgaagagcttggctttaaaaccgta
aacctggataactactgcggttatgccgaaatgggtgagggcgatgagatcgtcggcatc
gccggtcatctggatatcgttcctgtaggcggagactggacctacgatccgttcagcctt
acccgtgaaggcgatcatgtatacggccgcgggaccactgatgataaaggccctatcctg
gaagcgctctatgccatgaagcttctccgcgaccacggcgtgaagctgaacaaaagagtc
cgcctgatcatgggctgcaacgaggaaacaggttccagatgtatggctcactacaatcag
gtagcagaagagctttcctgcggtttcacaccggatgccagcttcccgtgtatccacggt
gaaaaaggccagcttgccatgatcgcctgctcaaaaaacacccggatcatttccatgaat
ggtggttttgtatccaatgcaatgtgtgacacctgtacaaccgttgttcccgctgaagac
ggtcttaaggaaaagctggaatccgcactttcccagacgaagctccaggaatataaggta
accgaagataatggtgagctcaccatctacgccaaaggtgttccggctcatgccagcact
ccccatctcggtgtcaatgctgcaggagtaacctttgaatgtctggcaaatgcaggcttt
gaagatgactttgtggaattctataactcccatatcggcactgcatgtgacggctccgga
attggcctgaaatttgcagatgaatacggcgatctgacattatgcaacggaatcgtcaaa
acagaaaacggtgtcatttcctgtaccatcgatatccgtgttccggtaactcttaatgag
accgatatccgcaaaatgtgtcaggacagactggaagataaaaacggccgtattgagatc
aaaaatattgttgccccgttattcttcccaagagaatctccgctggtaaatgcgctttac
aaagcgtacacagatgtgaccggcgataccgaacacaaaccaatggtcatcggaggcggc
acttacgcaaaatccctcaaaaacatcatagccttcggacctgaaaaagagggaattgac
taccgtatccacggagccgatgaatttatcctggtctccggcatggaagaagcagtactg
atctatatggaagcgatcaaaaatatgcttgcgatctga
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