Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I00228
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Entry
RBI_I00228 CDS
T03158
Name
(GenBank) Putative recombinase
KO
K06400
site-specific DNA recombinase
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99978 Cell growth
RBI_I00228
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Gene cluster
GFIT
Motif
Pfam:
Resolvase
Recombinase
Zn_ribbon_recom
Par3_HAL_N_term
Motif
Other DBs
NCBI-ProteinID:
CCO03961
UniProt:
W0U2J0
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All DBs
Position
I:complement(259060..260586)
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AA seq
508 aa
AA seq
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MTTVTIIQPTISEEQNHKLRCAAYCRVSSNSEDQLNSFMAQTRYYEKAFEKSDREQLVDI
YADEGITGTREDKRDEFQRMISDCRKGKIDRIYTKSISRFARNTKDCLKNIRELKSLGIT
VFFEKENIDTAKLTDEMMITIMGGLAQEESVSISKNLKWSYQKRFEKGIVNVFSAPFGFK
LNNGALIIDKIQAQIVEEIFDMFLNGIGYQRISEICQSKYKVYKDKFSYYGIRYILSNEK
YIGDSVYQKTFTTNNLPYRKIQNNGQLNKYCIQNTHEAIISIEIFEKAQKLIESRKHKNI
VSESPFRGKLICANCGTKYKRKDSRNKIYWVCRKHDNLAELCMNKRVEEKFIKQSFIRLY
NKLLFNYKQILVPLQTSLQDLKLKKFNGKTQVMDIHKEIAKLREQTHVLARLKTKGFLDE
AKYIEQTTELTAKINKLQAELKKLTRLDDEDETLDQIEMLIDFFERRDKPITEFEESAFE
SIVEKIVVIDQHELEFHLIGGIKFKENI
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgacaacggtaacgataatacagccgacaatatcagaagaacaaaaccataagctccgc
tgtgcggcatactgccgtgtgtcatcaaacagcgaagatcagcttaattcctttatggct
cagacaagatattacgagaaagctttcgaaaagtctgacagagaacagcttgttgacata
tatgcagatgagggaataacaggtactcgtgaggacaagcgtgatgagtttcagcgaatg
ataagcgactgtcggaaaggtaagatagacaggatatacacaaagtctatcagccgattt
gcccgaaacactaaggattgtctgaaaaatataagggagcttaaaagccttggaataaca
gtattctttgagaaagaaaacattgataccgcaaaactgactgatgaaatgatgataacc
attatgggcggtctggctcaggaggaatcggtatccatttcaaaaaacttgaaatggagt
tatcaaaaaagatttgaaaaaggaattgtaaatgttttttctgcaccatttggttttaag
ttaaataatggcgcattgattattgacaaaattcaagctcagattgtggaagaaattttt
gatatgtttttgaatggtattggttatcagcgaatttcagaaatctgtcagagcaagtac
aaagtgtataaagataaatttagttattacggcattcgatatattctttccaacgaaaaa
tatattggcgattcagtctatcaaaaaacatttacaacaaataatcttccatatagaaag
attcaaaacaatggacaattaaacaaatattgtattcagaatactcatgaagcaataatt
tcgatagaaatatttgaaaaagctcaaaaattgattgaaagcagaaaacataaaaatata
gtgtctgaatcaccgttcagaggaaaactgatatgtgccaactgtggaacaaaatacaaa
cgcaaagatagtagaaataaaatatactgggtttgccgcaaacacgataatttagcagaa
ttgtgcatgaataaacgagttgaggaaaagtttatcaagcaaagttttataagactatac
aacaaactattattcaattataagcaaattcttgtacctcttcaaacatcattgcaggat
ttgaaacttaaaaagttcaacggtaaaacacaagtaatggacattcacaaagaaatcgcc
aagcttcgagaacaaactcacgtccttgcaagactgaaaactaaaggttttctggacgag
gctaagtatattgagcagactactgagcttacggcaaagatcaataagctgcaagcagaa
ctgaaaaagcttacacgcttagacgacgaggacgaaactctggatcagatcgaaatgtta
atagacttttttgaaaggcgtgataagccgataaccgagtttgaagaatcggcatttgaa
agtatagttgagaagatcgtggttatagatcagcatgagttggagtttcacttgataggc
ggaataaagtttaaagaaaatatataa
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