Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I00510
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Entry
RBI_I00510 CDS
T03158
Symbol
grkA
Name
(GenBank) Spore germination protein KA
KO
K06295
spore germination protein KA
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99978 Cell growth
RBI_I00510 (grkA)
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Gene cluster
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Motif
Pfam:
GerA
Motif
Other DBs
NCBI-ProteinID:
CCO04234
UniProt:
W0U443
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Position
I:561054..562619
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AA seq
521 aa
AA seq
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MQNILITAADNKYNKISCRRNKMNTPDFRNYKNAEIDKTIDAAMTSLRTITGNSMDLNIM
NVKICSVSCALVSIEGMISTSAMSELIFRPIMELSAQKSKGNSEQVFDFLTKESLLAAER
KTVFNYGDVIQFLFSGFAVIFVEGLSKAVVYGIQGYDKRSVSEPASEQTIMCAQDSFTET
IRTNISLVRRRMKTPSLRFEMMQIGKRSSTDVCMVYMSDRASSDAVDRLRKQLKGIKLDT
VLTSGYIEPFIDEGFGSSVFSQMAYSERPDMICTRLNQGRICVFVDGTPFVLICPSLFAE
NFQTMDDFAEKPFYVTFMRWLKYIAFFLAVAFPGLYVALASFHPEVFTLKLLLNLAVSEE
STPYPLTVEVLVLMLLFEIMKEAGLRLPKPVGSTVSIVGGLIIGDAAVKSGLVSAPLLIV
VGITTTSSFVIPSLYQQTAILRLVYILVGGGSGLYGIALCTVLLMININSMDDLAVSYTA
PVTPFFSKGIKDVISRRSFRSYEKTHSTIKEYKLDEKGGSQ
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatattctgataacagccgcagataataaatacaacaaaatttcatgtaggaga
aacaaaatgaatacacccgatttcagaaactacaaaaacgctgagatagataagaccatt
gacgctgccatgacttcccttcgcaccataacaggcaattcaatggatcttaacataatg
aatgtgaagatatgctccgtaagctgtgcgttggtatccatagagggaatgatctcaacg
agcgcaatgtcagagcttattttcagacctataatggagctttctgcacaaaagtcaaag
ggcaattcagagcaggtattcgacttcctgacaaaagaaagcctgcttgccgccgagaga
aaaacggtctttaattatggtgacgtcatacagtttttgttttcgggctttgcggtcata
tttgtggaggggctttcaaaggctgttgtttacggtatccaaggttacgacaagcggtcg
gtttctgagcctgcaagcgagcagactataatgtgcgcacaggattcttttacggaaaca
ataagaactaatatttctcttgtgcgccgacgaatgaaaacaccatcgctgcggtttgag
atgatgcagataggaaagcgttcttccaccgacgtgtgcatggtctacatgagcgaccgg
gcaagctcagacgctgtggacaggctgagaaaacagctcaaaggcataaagctcgacact
gttctcacaagcggatatatcgaaccttttatcgacgaaggcttcggttcgtcagtgttt
tcacaaatggcttattccgaaagacctgatatgatatgcacaaggctaaatcagggcagg
atatgtgtttttgtggacggcactccatttgtgcttatctgcccatcgctttttgcggaa
aatttccagaccatggacgattttgcggaaaagcctttttacgtcacctttatgcggtgg
ctgaaatatattgcgttctttctagcggtggcttttccgggtctgtatgttgcactggcg
agttttcaccctgaggtcttcacattgaagcttcttctgaatcttgcagtttcagaggag
tcaacgccttatccgttgacagtggaggtgcttgtgctaatgcttctatttgagataatg
aaagaagcaggcttgcggcttccaaagcctgtgggaagcactgtttctatagtgggcggt
cttatcataggcgacgctgccgtaaaaagcggacttgtgtccgcccctctgcttatagtg
gtggggataaccacaacatcatcgttcgttataccgagcctttatcagcagacggctata
ttaaggctagtgtatatcctggtgggcggcggctcggggctttatggcattgcactttgc
actgtgcttttgatgataaatataaactccatggacgaccttgcagtatcttacaccgct
cctgttacgccatttttctcaaagggtataaaggacgttatttcaaggcggagctttcgg
tcatatgagaaaactcacagcaccattaaagaatacaagcttgacgaaaaggggggaagc
caatga
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