Staphylococcus aureus RF122: SAB1126
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Entry
SAB1126 CDS
T00303
Symbol
polC
Name
(GenBank) DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
sab
Staphylococcus aureus RF122
Pathway
sab03030
DNA replication
sab03430
Mismatch repair
sab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAB1126 (polC)
03430 Mismatch repair
SAB1126 (polC)
03440 Homologous recombination
SAB1126 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sab03032
]
SAB1126 (polC)
03400 DNA repair and recombination proteins [BR:
sab03400
]
SAB1126 (polC)
Enzymes [BR:
sab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAB1126 (polC)
DNA replication proteins [BR:
sab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAB1126 (polC)
DNA repair and recombination proteins [BR:
sab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAB1126 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
HHH_3
tRNA_anti-codon
RNase_H_2
T2SSK
Ribosomal_S19e
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
CAI80815
UniProt:
Q2YXK4
LinkDB
All DBs
Position
1218890..1223206
Genome browser
AA seq
1438 aa
AA seq
DB search
MAMTEQQKFKVLADQIKISNQLDAEILNSGELTRIDVSNKNRTWEFHITLPQFLAHEDYL
LFIHAIEQEFKDIANVTCRFTVTNGTNQDEHAIKYFGHCIDQTALSPKVKGQLKQKKLIM
SGKVLKVMVSNDIERNHFDKACNGSLIKAFRNCGFDIDKIIFETNDNDQEQNLASLEAHI
QEEDEQSARLATEKLEKMKAEKAKQQDNNESAVDKCQIGKPIQIENIKPIESIIEEEFKV
AIEGVIFDINLKELKSGRHIVEIKVTDYTDSLVLKMFTRKNKDDLEHFKALSVGKWVRAQ
GRIEEDTFIRDLVMMMSDIEEIKKATKKDKAEEKRVEFHLHTAMSQMDGIPNIGAYVKQA
ADWGHPAIAVTDHNVVQAFPDAHAAAEKHGIKMIYGMEGMLVDDGAPIAYKPQDVVLKDA
TYVVFDVETTGLSNQYNKIIELAAVKVHNGEIIDKFERFSNPHERLSETIINLTHITDDM
LVDAPEIEEVLTEFKEWVGDAIFVAHNASFDMGFIDTGYERLGFGPSTNGVIDTLELSRT
INTEYGKHGLNFLAKKYGVELTQHHRAIYDTEATAYIFIKMVQQMKELGVLNHNEINKKL
SNQDAYKRARPSHVTLIVQNQQGLKNLFKIVSASLVKYFYRTPRIPRSLLDEYREGLLVG
TACDEGELFTAVMQKDQSQVEKIAKYYDFIEIQPPALYQDLIDRELIRDTETLHEIYQRL
IHAGDTAGIPVIATGNAHYLFEHDGIARKILIASQPGNPLNRSTLPEAHFRTTDEMLNEF
HFLGEEKAHEIVVKNTNELADRIERVVPIKDELYTPRMEGANEEIRELSYANARKLYGED
LPQIVIDRLEKELKSIIGNGFAVIYLISQRLVKKSLDDGYLVGSRGSVGSSFVATMTEIT
EVNPLPPHYICPNCKTSEFFNDGSVGSGFDLPDKTCETCGAPLIKEGQDIPFETFLGFKG
DKVPDIDLNFSGEYQPNAHNYTKVLFGEDKVFRAGTIGTVAEKTAFGYVKGYLNDQGIHK
RGAEIDRLVKGCTGVKRTTGQHPGGIIVVPDYMDIYDFTPIQYPADDQNSAWMTTHFDFH
SIHDNVLKLDILGHDDPTMIRMLQDLSGIDPKTIPVDDKEVMQIFSTPESLGVTEDEILC
KTGTFGVPEFGTGFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIKTGICDLSS
VIGCRDDIMVYLMYAGLEPSMAFKIMESVRKGKGLTEEMIETMKENEVPDWYLDSCLKIK
YMFPKAHAAAYVLMAVRIAYFKVHHPLYYYASYFTIRASDFDLITMIKDKTSIRNTVKDM
YSRYMDLGKKEKDVLTVLEIMNEMAHRGYRMQPISLEKSQAFEFIIEGDTLIPPFISVPG
LGENVAKRIVEARDDGPFLSKEDLNKKAGLSQKIIEYLDELGSLPNLPDKAQLSIFDM
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
ttggcaatgacagagcaacaaaaatttaaagtgcttgctgatcaaattaaaatttcaaat
caattagatgctgaaattttaaattcaggtgaactgacacgtatagatgtttctaacaaa
aacagaacatgggaatttcatattacattaccacaattcttagctcatgaagattattta
ttatttatacatgcaatagagcaagagtttaaagatatcgccaacgttacatgtcgtttt
acggtaacaaatggcacgaatcaagatgaacatgcaattaaatactttgggcactgtatt
gaccaaacagctttatctccaaaagttaaaggtcaattgaaacagaaaaagcttattatg
tctggaaaagtattaaaagtaatggtatcaaatgacattgaacgtaatcattttgacaag
gcttgcaatggaagtcttatcaaagcgtttagaaattgtggttttgatatcgataaaatc
atattcgaaacaaatgataatgatcaagaacaaaacttagcttctttagaagcacatatt
caagaagaagacgaacaaagtgcacgattggcaacagagaaacttgaaaaaatgaaagct
gaaaaagcgaaacaacaagataacaacgaaagtgctgtcgataagtgtcaaattggtaag
ccgattcaaattgaaaatattaaaccaattgaatctattattgaggaagagtttaaagtt
gcaatagagggtgtcatttttgatattaacttaaaagaacttaaaagtggtcgccatatc
gtagaaattaaagtgactgactatacggactctttagttttaaaaatgtttactcgtaaa
aacaaagatgatttagaacattttaaagcgctaagtgttggtaaatgggttagggctcaa
ggtcgtattgaagaagatacatttattagagatttagttatgatgatgtctgatattgaa
gagattaaaaaagcgacaaaaaaagataaggctgaagaaaagcgtgtagaattccacttg
cacactgcaatgagtcaaatggatggtataccaaatattggtgcgtatgttaaacaggca
gcagactggggacatccagccattgcggttacagaccataatgttgtgcaagcatttcca
gatgctcacgcagcagcggaaaaacatggtattaaaatgatatacggtatggaaggtatg
ttagttgatgatggtgctccgattgcatacaaaccacaagatgtcgtattaaaagatgct
acttatgttgtattcgacgttgagacaactggtttatcaaatcagtataataaaattatc
gagcttgcagctgtgaaagttcataacggcgaaatcatcgataagtttgaaaggtttagt
aatccgcatgaacgattatcggaaacgattatcaatttgacacatattactgatgatatg
ttagtagatgcccctgagattgaagaagtacttacagaatttaaagaatgggttggcgat
gcgatattcgtagcacataatgcttcgtttgatatgggcttcatcgacacgggatacgaa
cgtcttggatttggaccatctacgaatggtgttatcgatacattagaattatctcgtacg
attaatactgaatatggtaaacatggtttaaatttcttagctaaaaaatacggtgtagaa
ttaacgcaacatcaccgtgccatttatgatacagaggcaacagcttacattttcataaaa
atggttcaacaaatgaaagaattaggcgtattaaatcataacgaaatcaacaaaaaactc
agtaatcaagatgcatataaacgtgcaagacctagccatgtaacattaattgtacaaaac
caacaaggtcttaaaaatctatttaaaattgtaagtgcatcattggtgaaatatttctac
cgtacgcctcgaattccacgttcattgttagatgaatatcgtgagggattattggtaggt
acagcatgtgatgaaggtgaattatttacggcagttatgcagaaggaccagagccaagtt
gaaaaaattgccaaatattatgattttattgaaattcaaccaccggcactttatcaagat
ttaattgatagagagcttattagagatacagaaacattacatgaaatttatcaacgttta
atacatgcaggtgacacagcgggtattcctgttattgcgacaggaaatgcacactatttg
tttgaacatgatggtatcgcacgtaaaattttaatagcatcacaacccggcaatccactt
aatcgctcaactttaccggaagcacattttagaactacagatgaaatgttaaacgagttt
cattttttaggtgaagaaaaagcgcatgaaattgttgtgaaaaatacaaacgaattagca
gatcgaattgaacgtgttgttcctattaaagatgaattatatacaccgcgtatggaaggt
gctaacgaagaaattagagaactaagttatgcaaatgcgcgtaaactgtatggtgaagac
ctgcctcaaatcgtaattgatcgattagaaaaagaattaaaaagtattatcggtaatgga
tttgcggtaatttacttaatttcgcaacgtttagttaaaaaatcattagatgatggatac
ttagttggttcccgtggttcagtaggttctagttttgtagcgacaatgactgagattact
gaagtaaacccgttaccgccacactatatttgtccgaactgtaaaacgagtgaatttttc
aatgatggttcagtaggatcaggattcgatttacctgataagacgtgtgaaacttgtgga
gcgccacttattaaagaaggacaagatattccgtttgaaacatttttaggatttaaagga
gataaagttcctgatattgacttaaactttagtggtgaatatcaaccgaatgcccataac
tacacaaaagtattatttggtgaggataaagtattccgtgcaggtacaattggtactgtt
gctgaaaagactgcttttggttatgttaaaggctatttgaatgatcaaggcatccacaaa
agaggcgctgaaatagatcgactcgttaaaggatgtacaggtgttaaacgtacaactgga
cagcatccagggggtattattgtagtacctgattacatggatatttatgattttacgccg
atacaatatcctgccgatgatcaaaattcagcatggatgacgacacattttgatttccat
tctattcatgataatgtattaaaacttgatatacttggacacgatgatccaacaatgatt
cgtatgcttcaagatttatcaggaattgatccaaaaacaatacctgtagatgataaagaa
gttatgcagatttttagtacacctgaaagtttgggtgttactgaagatgaaattttatgt
aaaacaggtacatttggggtaccagaattcggtacaggatttgtgcgtcaaatgttagaa
gatacaaagccaacaacattttctgaattagttcaaatctcaggattatctcatgggaca
gatgtgtggttaggcaatgctcaagaattaattaaaacaggtatatgtgatttatcaagt
gtaattggttgtcgtgacgatatcatggtttatttaatgtatgctggtctagaaccatca
atggcttttaaaataatggagtcagtacgtaaaggtaaaggtttaactgaagaaatgatt
gaaacgatgaaagaaaatgaagtgccggattggtatttagattcatgtcttaaaattaag
tacatgttccctaaagcccatgcagcagcatatgttttaatggcagtacgtatcgcatat
ttcaaagtacatcatccactttattactatgcatcttactttacaattcgtgcgtcagat
tttgatttaatcacgatgattaaagataaaacaagcatacgaaatactgtaaaagacatg
tattctcgctatatggatctaggtaaaaaagaaaaagacgtattaactgtcttggaaatt
atgaatgaaatggcgcatcgaggttatcgaatgcaaccgattagtttagaaaagagtcaa
gcgttcgaatttatcattgaaggcgatacactaattccgccgttcatatcagtgcctggg
cttggcgaaaacgttgcgaaacgaattgttgaagctcgtgacgatggaccatttttatca
aaagaagatttaaacaaaaaagctggattatctcagaaaattattgagtatttagatgag
ttaggctcattaccgaatttaccagataaagctcaactttcgatattcgatatgtaa
DBGET
integrated database retrieval system
