Staphylococcus aureus RF122: SAB1396c
Help
Entry
SAB1396c CDS
T00303
Name
(GenBank) probable exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
sab
Staphylococcus aureus RF122
Pathway
sab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SAB1396c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sab03400
]
SAB1396c
Enzymes [BR:
sab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SAB1396c
DNA repair and recombination proteins [BR:
sab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SAB1396c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
dCache_1
RecJ_OB
PepSY_TM_like_2
DUF4279
Motif
Other DBs
NCBI-ProteinID:
CAI81085
UniProt:
Q2YYB8
LinkDB
All DBs
Position
complement(1519211..1520548)
Genome browser
AA seq
445 aa
AA seq
DB search
MSDYLSVSALTKYIKYKFDQDPHLQSVLIKGELSNFKKHSSGHLYFNVKDKESVISAMMF
KGSASKLNFEPKEGDEVLLEARVSVFERRGNYQIYVNKMQLDGIGNLYQKLEALKKKLTE
EGCFDKANKKSIPKFPKKIAVLTASTGAAIRDIHSTINSRFPLAEQIQISTLVQGEKAKD
DIIEKIEYADSLGVDTIIVGRGGGSIEDLWNFNEEAVVRAIYNCKTPIISAVGHETDFTL
SDFAADIRAATPTQAAVIATPDQYELLQQIQQYQFTLTRFIKKHLEQQRKHIEHLSSYYK
FKQPTLLYDQQIQRRDDLEKRLKQQIQATFEQQRHRLMLLQQRYNLKALLSSVNQEQQNN
LQLTNQLVKLLNSKILSYKNDLKNKVENLNNLSPTNTMLRGYAIVNKKDEVITSTKDLTE
NDQLTLTMKDGLVDAKVTKVRCNND
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattatttaagtgtttcagctttaacgaaatatattaaatataaatttgatcaa
gatccacatctccaatctgtattgattaaaggtgagctttcaaatttcaaaaagcattca
agtggtcatttatactttaatgtgaaagataaagaaagcgttataagtgccatgatgttc
aaaggtagtgcttctaaattaaacttcgaacctaaagaaggagatgaagtcttattagaa
gcacgtgtttctgtttttgaacgtcgtggaaactatcaaatttatgtaaataaaatgcaa
ttagatggtatagggaacttatatcaaaaattagaagcattaaagaaaaaattaactgaa
gaaggttgttttgataaagcgaataagaaatcaatacctaagtttcctaaaaaaattgca
gttttaacagcgagtacaggtgccgcaattcgagatatccattcaacgataaatagtcgt
tttccattagctgaacaaatacaaattagtactttggttcaaggtgaaaaagcaaaagac
gacattattgaaaaaattgaatatgcagatagtttaggagtagataccattattgtaggt
cgaggcggtggatccatagaagatttatggaatttcaacgaagaagctgtcgtccgtgca
atatataattgtaagacaccgattatatcagcagtaggtcatgaaacagactttacatta
agtgattttgctgcagacatcagagctgcgactccaactcaagctgctgttattgcaaca
ccagaccaatatgaattgctgcaacaaatacagcaatatcagtttacattgactcgtttc
atcaagaaacatttagaacaacaacgtaaacatattgaacatttgtcatcgtattacaag
tttaaacaaccaactttattgtatgatcaacagatacaacgtcgagatgatttagaaaag
agactgaaacaacaaattcaggccacttttgaacaacagagacatcgattaatgctgttg
caacaacgctataatttaaaagcgttactaagtagtgttaatcaagaacaacaaaataat
cttcaattgacaaaccaacttgttaaattattgaattctaagatattaagttataaaaat
gatttgaaaaataaagtagaaaacttaaacaatttaagtccaactaatacaatgttgcgt
ggatatgcaattgttaataaaaaagacgaagtcattacgagtactaaagatttaacagaa
aatgatcaattgacgttaacaatgaaagatggcttagtagatgcaaaagttacgaaagta
aggtgtaataatgactaa
DBGET
integrated database retrieval system
