Sulfurihydrogenibium azorense: SULAZ_0563
Help
Entry
SULAZ_0563 CDS
T00876
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
saf
Sulfurihydrogenibium azorense
Pathway
saf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
saf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SULAZ_0563 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saf03019
]
SULAZ_0563 (pnp)
03016 Transfer RNA biogenesis [BR:
saf03016
]
SULAZ_0563 (pnp)
Enzymes [BR:
saf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SULAZ_0563 (pnp)
Messenger RNA biogenesis [BR:
saf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SULAZ_0563 (pnp)
Transfer RNA biogenesis [BR:
saf03016
]
Prokaryotic type
tRNA degradation factors
SULAZ_0563 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
DUF5667
Motif
Other DBs
NCBI-ProteinID:
ACN99597
UniProt:
C1DTW6
LinkDB
All DBs
Position
complement(505186..507309)
Genome browser
AA seq
707 aa
AA seq
DB search
MEIEEIKVQTEVNGAPFIIETGYFAKQANGAVIVRQGDTAVLVAAVMSEEPQADIDFLPL
TVEYREKYYAYGKIPGGFVKREGKPTDREILVARNIDRPIRPLFPKGFYNDIVITAYTLS
ADDKYDPDVLGIVGASAALHISDIPFEGPIAGVRVCRVNGEFIVNPTYQQKAQADIEIVV
AGSKDAIVMVEGGAKEVPEEDILEAMMFGHQEIKKLIELQEELRLKCGKEKIQVAIDEEE
IILKDKLKEFSYEKIKEAFKITDKKQRNKTINAIFEEAFKTLEIPEEKIKKASFIYKDIV
SNVMRDNILNEGIRIDGRKPEEIRPIWIKVGVFPRNHGSAIFTRGQTQAFVTVTLGSLSE
GQIEESIEAGEVMKRFMLHYNFPPFSTGEAKPPRATSRREIGHGNLAERALEPLIPPEEE
FPYAIRVVSDILESNGSTSMATVCGGSLALFDAGVPMKKHVAGIAMGLIKAEDKFVILSD
ILGDEDHLGDMDFKVAGTRDGVTSIQMDIKVKGLTKEILEKALQQARDGRNYILDLMYQA
IPEPRKEVSPYAPTVTTLRVLPDKIPIIIGPAGKNIKKIIEETKVKIDLDPEGLVKIYAT
SKEAAEKAVSMINELILDVEVGEVYMGKVTRVEDYGAFVELLPGRLSLLHVSQITGERLK
SAKEKIKVGDVLKVKVSEIDDQGRIKVSLKDVPENVEPKNKFLFKEE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggagatagaagaaattaaagtccaaacagaggttaatggagctccttttataattgaa
acaggatactttgcaaaacaagctaacggggctgtgatagtaagacagggggatactgct
gttttagtggctgcagtaatgtctgaagaaccgcaagctgatatagattttcttccattg
actgttgagtatagagagaaatactacgcttacggtaaaatccccggcggttttgtaaaa
agagaaggaaaacctacagacagagagattttggtagcaaggaacatagacagacctatc
agacctttatttccaaaaggtttttacaatgatatagttatcaccgcttacacactatca
gcagatgataaatacgatccagatgttttaggaatagtaggagcttctgcagctttacat
atatcagatataccttttgaaggccctattgcaggtgttagagtttgtagagtaaacgga
gagtttatagtaaacccaacttaccaacaaaaagctcaagcagatattgagatagttgtt
gctggttcaaaagatgcaatagttatggtagaaggtggagctaaagaagttcctgaagaa
gatattcttgaagctatgatgtttggccatcaagaaataaaaaagttaatagagcttcaa
gaagaattaagattaaagtgtggtaaagaaaaaatacaagttgctatagatgaagaagaa
ataattttaaaagataagttaaaagaattttcatacgaaaaaatcaaagaagcttttaaa
atcacagacaaaaagcaaagaaacaaaactataaacgctatatttgaagaagcctttaaa
acccttgaaataccagaagagaaaataaaaaaagcatcctttatttacaaagatatagta
agtaatgtaatgagagataacatattaaatgaaggtataagaatagatggaagaaagcca
gaagaaataagacctatatggattaaagtcggagtatttccacgaaaccacggatctgca
atatttaccagagggcaaactcaagcttttgttacagtaactttaggttctctttctgaa
ggtcagatagaggaaagtattgaggctggagaagtgatgaagaggtttatgcttcactat
aacttccctcctttctctacaggtgaagctaaacctccaagggcaacttcaagaagagag
ataggacacggaaatttagcagaaagggctttagaaccccttataccaccagaagaagag
ttcccatacgcaataagggttgtatcagatatattagaatctaacggatctacatctatg
gcaactgtttgtggtggatctttagctttatttgatgctggagttcctatgaagaaacat
gttgctggtatagcaatgggattaattaaagctgaagacaaatttgtaatactttctgac
atacttggagatgaagaccaccttggagatatggactttaaagttgcagggacaagagac
ggtgttacatctatccagatggacataaaagtcaaaggtctaaccaaggaaatccttgaa
aaagctttacagcaagcaagagatggcagaaattacatactagaccttatgtaccaagct
ataccagagccaaggaaagaagtatctccttatgcacctactgttactactttaagagtt
ttacctgataaaatacctatcataataggtccagccggtaaaaacattaagaaaattata
gaagaaactaaagttaaaattgatttagatccagaaggattagtcaaaatatacgcaact
tctaaagaagcagcagagaaagctgtaagcatgataaacgaacttattttagacgtagaa
gtaggcgaagtttacatggggaaagttacaagggtagaggactatggagcttttgttgag
ctactaccgggaagattatctttactacatgtatcccagataactggtgagagattaaag
tctgcaaaagaaaagataaaagtcggtgatgtactaaaagttaaagtgtctgaaatagac
gatcaaggaagaattaaagtttcattaaaggatgtacctgaaaatgtcgaacctaaaaat
aaattcctttttaaggaagagtaa
DBGET
integrated database retrieval system
