KEGG   Streptomyces albulus ZPM: SAZ_36920Help
Entry
SAZ_36920         CDS       T03896                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
sall  Streptomyces albulus ZPM
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sall00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    SAZ_36920
Enzymes [BR:sall01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SAZ_36920
DNA repair and recombination proteins [BR:sall03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     SAZ_36920
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
LinkDB All DBs
Position
8393933..8394838
Genome map
AA seq 301 aa AA seqDB search
MSPITVVEGRRLSLTNLDKVLYPETGTTKGEVLHYCTTTADVLLPHLHDRPVSFLRYPDG
PDGQRFFTKNVPPGAPSWVKSCEVPHSRSGPARQVLLQDLASLVWAANLVVELHTPQWTC
GAPGVADRLVFDLDPGAPATIVECCTAARWLRDRLAADGLDAYAKTSGSKGLHLVVPIEP
TPADRTTAYARTLAVEAGVALGELVTHKMTRALRPGKVFIDFSQNAAAKTTATAYTLRAR
PLPTVSTPVTWDEVAACTQPGQLTFLFGEIAGRRARYGDLHAPLLGAERARPVPRGARRS
A
NT seq 906 nt NT seq  +upstreamnt  +downstreamnt
atgtcgccgatcaccgtcgtggaggggcggcgcctctcgctgacgaacctggacaaggtc
ctctatcccgagaccggcaccaccaagggtgaggtgctgcactactgcaccaccaccgcg
gacgtgctgctcccgcacctccacgaccgtccggtgtccttcctgcgctaccccgacggg
ccggacggccagcgcttcttcaccaagaacgtgccgcccggcgcgccctcctgggtgaag
agctgcgaggtaccccattcgaggtcggggccggcccggcaggtgctcctccaggacctc
gcctcgctggtctgggccgccaacctcgtcgtcgaactgcacaccccgcaatggacctgc
ggcgcgccgggcgtggccgaccgactggtcttcgacctggatccgggcgcccccgccacc
atcgtggagtgctgcaccgccgcccggtggttgcgcgaccggttggcggcggacggcctc
gacgcctacgccaagaccagcggctccaaggggctgcacctcgtcgtgcccatcgagccc
acccccgccgaccgcaccaccgcctacgcccgtacgctggcggtcgaggccggcgtcgcc
ctcggcgagctggtcacgcacaagatgacccgggcgctgcggccgggcaaggtcttcatc
gacttctcgcagaacgccgcggccaagaccaccgcgaccgcctacacgctgcgggcccgc
cccctgccgaccgtgtccacccccgtcacctgggacgaggtcgccgcctgcacccagccg
ggccaactcaccttcctcttcggcgagatcgccggtcgccgcgcgcgctacggggacctg
cacgcaccactgctcggcgcagaacgtgcccgcccggtaccgcgcggcgcccgccggtcc
gcgtag

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