KEGG   Streptomyces albus DSM 41398: SLNWT_5554Help
Entry
SLNWT_5554        CDS       T03823                                 

Definition
(GenBank) DNA polymerase LigD, ligase domain-containing protein
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
sals  Streptomyces albus DSM 41398
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sals00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    SLNWT_5554
Enzymes [BR:sals01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SLNWT_5554
DNA repair and recombination proteins [BR:sals03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     SLNWT_5554
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
6474861..6475865
Genome map
AA seq 334 aa AA seqDB search
MNELLRALPEAQQRLLGVAPAPVESAASPMMAVLSDRRDFGSGWLFERKLDGVRTLATRD
GDRVRLLSRTGRAVQGSYPEIAEAVAAQPGEALTLDGEIVAFAHGRTDFARLQRRMQLTD
PRRARASGVAVTYYVFDLLRLDGIDLTRLPLRTRKSLLRRAVDFHPPIRFTPHRNQAGPA
EFEAACARGWEGLIAKRAEGRYLRRRSPDWLKLKCGRGQELVIGGWTAAGGARTGFGALL
LGHYEDGRLRYAGKVGTGFDHTALLRIRALLDELARPTSPFAGPVGERGAHWAEPVLVAE
IGFTEWTRDGMLRHPRFLGLRTDKPAGEVVREHP
NT seq 1005 nt NT seq  +upstreamnt  +downstreamnt
atgaacgagctgctgcgcgccctgcccgaggcccagcagcggctgctcggggtggccccg
gctccggtcgagtcggcggcctcgccgatgatggcggtgctcagcgaccggcgggacttc
ggctccggctggctcttcgagcgcaagctcgacggcgtccgcaccctggccacccgcgac
ggggaccgggtccggctgctctcccgtaccggccgtgcggtgcaggggagttaccccgag
atcgccgaggcggtcgccgcccagcccggcgaggccctcaccctcgacggcgagatcgtc
gccttcgcgcacggccgcaccgacttcgcccgcctccagcggcgcatgcagctcaccgac
ccgcgccgggcccgggccagcggcgtcgccgtcacgtactacgtcttcgacctgctgcgc
ctggacggcatcgacctgacccggctgccgctgcgcacccgcaagtccctgctccgccgc
gccgtcgacttccatccgcccatccgcttcaccccgcaccgcaaccaggccggaccggcg
gagttcgaggccgcctgcgcccgaggctgggagggcctgatcgccaagcgggccgagggg
cgctatctgcggcggcgctccccggactggctcaagctgaagtgcgggcgcggccaggag
ctcgtcatcggcggctggaccgccgccgggggcgcccgcaccggcttcggggcgctgctc
ctcggccactacgaggacggccgcctccggtacgcgggcaaggtcggcaccggcttcgac
cacaccgccctgctccgcatccgcgccctcctcgacgaactcgcccgccccacctcgccg
ttcgccggtccggtcggcgaacgcggcgcccactgggcggagccggtgctcgtcgcggag
atcggcttcaccgagtggacccgcgacggcatgctccgccacccccgcttcctcggactg
cgcaccgacaagcccgccggagaggtcgtacgggagcatccctga

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