KEGG   Salegentibacter sp. T436: AO058_01020Help
Entry
AO058_01020       CDS       T04614                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
salt  Salegentibacter sp. T436
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:salt00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    AO058_01020
Enzymes [BR:salt01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     AO058_01020
DNA repair and recombination proteins [BR:salt03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     AO058_01020
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(233146..235605)
Genome map
AA seq 819 aa AA seqDB search
MGLEDYKKKRNFNNTPEPGADFSTENRGRFVIQRHEATRLHYDLRLEMEGVLKSWAVPKG
PSMNPKDKRLAIETEDHPVKYLHFEGTIPKGNYGAGEMQIWDKGTFKAAAKTNDNLEEQW
EDGNLKIVFSGSKIKGEFALVKTKRGDKKNQWLLIKKKDDFSTDLDYDAEVFTEKSSKSK
DSDKSKGKVRKIKPSEFIKPMLATTGKRIFNDPDWIYELKWDGYRALANIEDGKVDLYSR
NGISFNSKFSKLVKDLEQIEHDVILDGEIVVLNKEGIPQFQALQNYNENTPGALRFYVFD
MLFLNGHSMLDLPLLERKSLIPEVLEDLDMVQYCDHIEGMGTAFYNKAIDLGLEGVIAKK
ADATYSPGYRTEKWLKLKGENTREVLICGYTTSEGAIFGSLIMGAYEDEDLKYIGNCGTG
FSNDEQKALLKKFKSRERKTSPFSEKINLKGREPVWMRPDLIAEVKFSEITKTGKLRHPV
FKALRKDKEPEEILAEDIVENKVSEEKKSTKSSSIRKSGESLEIDGIDVPFTNLDKVYWP
DSGFRKYDLIDYYIQVSEVMLPYLKDRPQNLHRHPNGIKKQGFYQKDNEGNLPDWIATTE
IYSESSEKDIEYLLCQNEPTLLYMANLGCIEINPWNSRVKNLDSPDYTVIDLDPSDKNTF
EEVIEVAQAAKEVMDLAKIEGYCKTSGSSGLHIYIPLGGNYSYDEARDFTKLLCYYIADK
VPKLTSMDRAKKKRKDKIYLDYLQNRRGQTLASAYCARPKPGAPVSAPLEWKEVKSGLKI
LDFTITDMPQRIQKKGDLFTKVLEEGIDMEKAMQNLESS
NT seq 2460 nt NT seq  +upstreamnt  +downstreamnt
atgggtttagaagattataaaaagaaacgtaactttaataacacaccagaacccggtgcc
gatttttctaccgaaaaccggggaaggtttgttattcagcggcacgaggctacgcgcctg
cactacgatctacgcctggaaatggaaggcgttttaaaaagttgggctgttcctaaaggt
ccctccatgaatcctaaagacaaacgtcttgccatagaaaccgaagatcatcccgtaaaa
tatttacattttgaaggtacaattcctaaaggaaattatggtgcaggggagatgcaaatt
tgggataaaggcacgtttaaagctgcggcaaaaaccaatgataatcttgaagaacaatgg
gaagatggtaacctgaaaatcgtctttagcggcagcaaaattaaaggtgaatttgcgtta
gtgaaaactaagcgaggtgataaaaagaaccagtggttgttgattaaaaagaaagacgat
ttttctaccgatctggattacgatgcggaagtttttactgaaaaatcttctaaaagcaag
gattccgataaatctaaaggaaaagtcaggaaaataaaaccttcagaatttataaagccc
atgctcgctaccacgggcaaaagaatatttaacgatcccgattggatttacgagttaaaa
tgggacggttaccgcgcgctggccaatattgaagacggcaaagtagatctttattcccgc
aatgggatttcctttaattctaagttttcaaaattggttaaagatttagaacagattgag
cacgatgtgattttagatggtgaaatcgtggtattgaataaagagggaattccgcagttc
caggctttgcaaaattataatgaaaacacgccgggagccttgcgtttttatgtttttgat
atgctttttctcaatggccattctatgctggatttaccacttttagaacgcaaaagttta
atccctgaagttttggaagatctggacatggttcaatattgcgatcatatagaaggaatg
ggcaccgcattttataataaagccatagaccttggattggaaggggtgatcgccaaaaaa
gccgatgctacctattctcccgggtatagaactgaaaaatggctaaagttaaaaggtgaa
aacacccgggaagtgcttatttgcggttacaccacttcagaaggtgctatttttggttcc
ttaattatgggcgcttatgaagatgaagatttaaaatatattggaaattgcggcaccggt
ttttcgaacgacgaacagaaagcattgctaaaaaagtttaaaagtcgtgagcgtaaaacc
tctcctttttcagaaaaaataaatttaaaaggaagagaaccggtttggatgcgccccgat
ttgattgctgaagtaaagttttcagaaattacaaaaaccggtaaattaaggcatccggtt
tttaaggctttgcgaaaagataaagaaccggaagaaattttagccgaagacattgttgaa
aataaagtttccgaagaaaagaaatcaacaaaatcatcttctataaggaagtcaggagaa
agcctggaaatagatgggatagatgttccgtttactaatctggacaaagtatactggcct
gattccgggttcaggaaatacgatttaatagattattacatccaggtttcagaagtgatg
ttaccctacttaaaagatcgtccccaaaatttacatcggcatcctaacggcattaaaaaa
cagggattttaccagaaagacaacgaaggaaatttacccgattggatagcaaccacagaa
atttattcggaatcttctgaaaaggatattgagtatttgctttgccaaaatgaaccaacg
cttttatatatggctaatttgggttgtatagagatcaatccgtggaattcccgggtgaag
aatcttgattcaccagattatacggtaatagatttagacccttcagataaaaatactttt
gaagaggttattgaagttgcccaggctgcaaaagaagtgatggatttggctaaaattgag
ggttattgcaagacttcaggttcaagtggacttcatatttatattccgctgggcggaaat
tattcgtatgatgaagcacgggattttaccaaattgctgtgttattatatcgcagataaa
gttccaaaattaaccagtatggatcgtgctaaaaagaagcgaaaagacaagatctacctg
gattatttacaaaaccgaagaggccaaactttagcttctgcctattgtgcacgcccaaaa
cccggtgcgcctgtttccgctcctttagaatggaaagaagtgaaaagcggacttaaaatt
ctcgattttaccattacagatatgccgcagcgaattcagaaaaaaggagatctatttacc
aaagtactggaagaggggattgatatggagaaggccatgcaaaacctggaatcttcctaa

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