Snodgrassella alvi: SALWKB2_0735
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Entry
SALWKB2_0735 CDS
T03063
Name
(GenBank) Poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
salv
Snodgrassella alvi
Pathway
salv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
salv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SALWKB2_0735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salv03019
]
SALWKB2_0735
Enzymes [BR:
salv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SALWKB2_0735
Messenger RNA biogenesis [BR:
salv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SALWKB2_0735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AHN28117
UniProt:
X2HAL0
LinkDB
All DBs
Position
800009..801271
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AA seq
420 aa
AA seq
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MAQHHIQADDLSFAAEKVITRLQKEGYQAYVVGGAVRDLLLGVTPKDFDVATDATPEQIH
KLFRRSRIIGRRFPIVHVMVGPETIEVTTFRGGAVNSHNELGRIMKDVSFGTLEQDAMRR
DFTANALYYDPKQQVVLDFHHGVEDILNRRLVMIGNPAERYQEDPVRMLRAARLSGKLGF
TVDKHTSKPIAECAQLLKREPPARLFDEVLKILFSGYAQACLRQMNNLGLKDIHPLLDAL
MPGGESNDNIVALALHNTDERLRADKSVSMGFVLAAVLWPHIRTVWQRELNSGMRSSAAM
NAAITSERQHVDKNWGVPQRYSVTMREIWSLQPQFEIMRGARPYRLLGQPRFRAAFDFMC
LRASLGELSQDTVQWWQAFQHGSDVEREQLIRTASQSEKNSTRQKRYRNRRTNKPKQEEA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
ttggcacaacaccatattcaggcagatgatctgagttttgcagcggaaaaggtaatcacc
cgcttgcagaaggaaggctatcaggcttatgtggtaggtggagctgtgcgtgatttactg
cttggtgtgacacctaaagattttgatgtggcaacagatgccacacccgaacagatacat
aaacttttccggcgcagccgcattattggcaggcgttttccgattgtgcatgttatggtt
ggtccggaaactatcgaggtaacaacttttcggggcggggcagtcaatagccataatgag
ctaggcaggattatgaaggatgtcagtttcggtacgcttgaacaggatgcaatgcgccgg
gactttactgccaacgctctatactatgatccgaagcagcaagtagttttggattttcat
catggcgttgaagacatacttaaccggcgtctggtaatgataggtaatccggctgagcgc
tatcaggaggatccggtgcgcatgctacgggcagccagattatctggcaaacttggcttt
accgtagataaacatacatctaaaccgatagctgaatgtgcgcagttgttaaagcgggaa
ccgccggcacggctatttgatgaagtactgaaaatattgttcagtggttatgcacaggca
tgtttgcgccagatgaataatcttggtctgaaagatattcatcctctacttgatgcatta
atgccgggcggcgaaagtaatgataatattgtcgcattggctctgcacaatactgacgaa
cgcctgcgggcagataaatctgtatctatgggctttgtactggcggctgtattatggccg
catatcagaacagtatggcagcgggaactgaatagtggtatgcgctccagtgcggcgatg
aatgcggcgattacttcagaacgtcagcatgtagataaaaactggggtgtgccgcagcga
tatagtgtaactatgcgtgaaatctggagtttgcagccgcagtttgaaattatgcgcggg
gcgcgtccttaccgcttactcggacagccgcgttttcgtgctgcttttgattttatgtgt
ttgcgtgccagtctgggcgaattatcacaggatacggttcagtggtggcaggcttttcag
catggttcagatgtagagcgtgagcaattaattcgtactgcttcgcaatcagaaaaaaat
tcaacaagacaaaaaagataccgtaacagacgtaccaacaaacctaagcaggaggaagca
tga
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