Snodgrassella alvi: SALWKB2_2085
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Entry
SALWKB2_2085 CDS
T03063
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
salv
Snodgrassella alvi
Brite
KEGG Orthology (KO) [BR:
salv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
salv03016
]
SALWKB2_2085
03036 Chromosome and associated proteins [BR:
salv03036
]
SALWKB2_2085
Transfer RNA biogenesis [BR:
salv03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SALWKB2_2085
Prokaryotic type
SALWKB2_2085
Chromosome and associated proteins [BR:
salv03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
SALWKB2_2085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
GIDA_C
FAD_oxidored
FAD_binding_2
Pyr_redox_2
AlaDh_PNT_C
HI0933_like
Thi4
DAO
Pyr_redox
Pyr_redox_3
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AHN29467
UniProt:
X2HEB8
LinkDB
All DBs
Position
complement(2307265..2309157)
Genome browser
AA seq
630 aa
AA seq
DB search
MNYPIEYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLV
RELDALGGAMALAADYGGIQFRRLNASKGPAVRATRAQADRILYKAAIRSMLENQPNLQL
FQQQVEDIVVEHGRAVGVMTAMGVIFRSRAVVLTAGTFLAGKIHIGLENYAGGRAGDPAA
QRLSGCLKELNLPQGRLKTGTPPRIDGRSIDFSQLKEQPGDNPAPVFSVRGSREIHPQQI
SCWITHTNSHTHDIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKESHQIFLEPE
GLKTHEYYPNGISTSLPFDIQLKLVHSMPGLQNAHILRPGYAIEYDYFDPRNLKASLETK
NIAGLFFAGQINGTTGYEEAAAQGLLAGANAVLYLREAEPLVLQRDQAYLGVLVDDLITK
GVTEPYRMFTSRAEYRLQLREDNADMRLTGLGRAVGLVNDAQWQIFQRKQEAVERELQRM
SHTWYTPLNLPLSDQQRVLGQPLSKESSLLDMLRRPNVSYADLMTLPNAQQEVLEADAAE
QVEIQAKYQGYIERQNEEISHRQNLEKLKLPASIDYTLVKGLSAEVQQKLNQFRPETVGQ
ASRISGITPAAVALLMVHLKRGFEGAKKYE
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaattatccgattgaatacgatgtaattgtggtaggcggcggacatgccggtacagag
gcggctttggccgctgcgcgtatgggtgcgcaaacattattacttacccacaatatcgaa
actctgggacaaatgtcgtgtaatccgtctatcggcggcatcggcaaaggtcatctggtg
cgtgaactggatgcactgggcggggcaatggcactggctgctgattacggaggtattcaa
tttcgtcgcctgaatgcatcaaaaggacccgcagtacgtgcaacacgggcacaggccgac
cgcattctgtataaagcagctatccgttccatgctggagaatcagccgaacctgcaatta
tttcagcagcaggtagaagatattgttgtggaacatggccgtgctgtcggggtaatgacg
gcaatgggtgttatattccgtagtcgtgcagtggtgctgacggctggtacctttctggct
ggtaaaatccatattggtctggaaaactatgccggtggccgtgccggagatccggctgca
cagcgtttatcaggctgtctgaaagagctgaatttgccgcagggacgtctgaaaaccggt
actccgccaagaattgatggacgcagtattgatttcagccagcttaaagaacaaccgggc
gacaatccggcaccagtattttcagtacgtggcagccgggagatacatccgcagcagatt
tcctgctggattactcatactaatagtcacacccatgatattatccgtagcggtttcgac
cgcagcccgatgtttaccggtaagattgagggagtcggtccacgttactgcccttctata
gaagataaaatcaatcgttttgccgataaagaaagccatcagatttttctggaacctgaa
gggctgaaaacacacgaatattatccgaacggtatttctaccagtctgccgtttgatatt
cagttaaagctggtgcattcaatgcccggattgcagaacgcacatattctgcgccccggt
tatgccattgaatatgattactttgatccgcgtaatctcaaagccagtctcgaaaccaaa
aatatagccggactgttttttgccggacagattaacggcactaccggctatgaagaagca
gctgctcagggcttactagccggagccaatgctgtattatatcttcgtgaagcagaacca
ctggtattgcaacgtgatcaagcttatttaggtgtactggtggatgatctgattactaaa
ggcgttactgagccgtaccgcatgtttaccagtcgtgccgaataccgtctgcaattgcgt
gaagacaatgctgatatgcgtctgaccggtctggggcgagctgttggtctggtcaatgat
gcgcaatggcaaatatttcagcgaaaacaggaagcagttgagcgcgaactgcaacgcatg
agccacacatggtatacaccattgaatctgccgctgagtgatcagcagcgggtgctgggt
cagccattgagtaaagaatccagtttgctggatatgctgcgccgacctaatgtcagctat
gctgacttaatgactttacctaatgcacagcaagaagtacttgaagccgatgcggctgag
caggtagaaattcaggccaaatatcagggttatattgagcggcaaaatgaagaaatcagc
caccgtcagaatctggaaaaactaaaattaccggccagcattgattacacgctggtaaaa
ggcctttccgcagaggtacaacaaaaactgaatcaatttcgtcccgaaacagttggacag
gcttcacgtatatccggtatcacaccggcggcagtcgcattactgatggtgcatctgaaa
cggggttttgagggagcaaaaaaatatgaatga
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