Streptomyces ambofaciens: SAM23877_5004
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Entry
SAM23877_5004 CDS
T04055
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
samb
Streptomyces ambofaciens
Brite
KEGG Orthology (KO) [BR:
samb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
samb03021
]
SAM23877_5004
Transcription machinery [BR:
samb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SAM23877_5004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_23
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
AKZ58049
UniProt:
A0A0K2AYF6
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All DBs
Position
5306043..5306954
Genome browser
AA seq
303 aa
AA seq
DB search
MASAFCPSRSSRADLDWTVLHAAKTAPVRATGGPDRQASPAAGQAPSTVGQAFPTAGRLS
SDSSGAAFGSVTSLEEVGPVTGTDAGTEHGQAEQPEGRGTGAESTAERSARFERDALEFL
DQMYSAALRMTRNPADAEDLVQETYAKAYASFHQFREGTNLKAWLYRILTNTFINSYRKK
QREPQRSAAEEIEDWQLARAESHMSTGLRSAESQALDHLPDSDVKQALQAIPEEFRIAVY
LADVEGFAYKEIADIMGTPIGTVMSRLHRGRRQLRGMLEDYARDRGLVPAGAGESNEAKG
SGS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagccttctgcccgagtcgcagcagccgcgccgacctggactggacagtgctg
cacgcggcgaagaccgctcccgtccgggcgacgggcggacccgaccggcaggcgtcacct
gccgcgggacaagcgccctcgaccgttggacaagcgttcccgaccgcaggtcgtctatcc
tccgattcgagcggggccgcattcggctccgtgacgtcactggaggaggtgggtccggtc
actgggaccgacgcagggaccgaacacggccaggcggagcagcccgagggccggggcacg
ggcgcggagtcgaccgcggagcgcagcgcgcgcttcgagcgggacgcgctggagttcctc
gaccagatgtactcggccgcgctgcgcatgacgcgtaacccggccgacgccgaggacctg
gtgcaggagacctacgccaaggcgtacgcgtccttccaccagttccgcgagggcaccaac
ctcaaggcgtggctgtaccgcatcctcaccaacaccttcatcaactcgtaccgcaagaag
cagcgcgaaccccagcgcagcgcggccgaggagatcgaggactggcagctcgcgcgcgcc
gagtcgcacatgtcgacggggctgcgctccgcggagtcgcaggcgctggaccacctgccc
gactcggacgtgaagcaggcgctgcaggcgatccccgaggagttccgtatcgccgtgtac
ctggcggacgtcgagggctttgcctacaaggagatcgccgacatcatggggacacccatc
ggtacggtgatgtcccggctgcaccgtggacggcgtcagctgcgcggcatgctggaggac
tacgcccgcgaccgcggcctggtcccggccggtgccggagagtcgaacgaagcgaaaggc
tcggggtcatga
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integrated database retrieval system
