KEGG   Streptomyces ambofaciens: SAM23877_5081Help
Entry
SAM23877_5081     CDS       T04055                                 

Gene name
polK
Definition
(GenBank) DNA polymerase LigD, polymerase domain-containing protein
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
samb  Streptomyces ambofaciens
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:samb00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    SAM23877_5081 (polK)
Enzymes [BR:samb01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SAM23877_5081 (polK)
DNA repair and recombination proteins [BR:samb03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     SAM23877_5081 (polK)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(5386734..5387615)
Genome map
AA seq 293 aa AA seqDB search
MAPITEVEGRRIALSNLDKVLYPAAGLTKGELLHHYATTAEVLLPHLRDRPVSFLRYPDG
PDGQVFFTKNVPPGTPDWVTTAEVPRSEGPARMVLVQDLPSLMWAANLVTEFHTHQWTAD
APAEADRLVFDLDPGPPATVVHCCEVALWLRERLAADGIEAYAKTSGAKGLHLLAGVRGA
SSERVSEYAKALAVEAERALPRLVVHRMTRSLRPGKVFVDWSQNAARKTTAAPYTVRARS
VPAVSTPVTWDEVAGCGRAEQLVFRPDDIGPRVRDFGDLLAPLFERRRAARLP
NT seq 882 nt NT seq  +upstreamnt  +downstreamnt
atggcgcctatcactgaggtggaggggcgacggatcgccctcagcaacctggacaaggtg
ctgtatcccgcggccggcctcaccaagggcgagctgctgcaccactacgcgacgaccgcc
gaggtactgctgccgcacctacgggaccgccccgtctccttcctgcgctacccggacggt
ccggacggccaggtgttcttcaccaagaacgtgccgccgggtacgcccgactgggtcacc
accgccgaggtgccccggtcggagggaccggcgcgcatggtgctggtgcaggatctgccg
agcctgatgtgggcggcgaacctggtgaccgagttccacacccaccagtggaccgcggac
gcccccgccgaggccgaccgactggtcttcgacctggacccggggccgcccgcgaccgtc
gtgcactgctgcgaggtcgccctgtggctccgggagcggctggcggcggacgggatcgag
gcgtacgccaagacgtccggggccaaggggctgcacctgctggcgggggtgcggggggcg
tcgtcggagcgggtgtcggagtacgcgaaggcgttggcggtggaggcggagcgggccctt
ccgcgcctcgtggtgcaccggatgacgcgcagcctgcggccgggcaaggtgttcgtggac
tggagccagaacgccgcgcgcaagaccacggccgccccctacacggtgcgggcacgttcg
gttccggcggtctccactccggtgacgtgggacgaggtggccgggtgcgggcgggcggaa
cagctcgtcttccgcccggacgacatcgggccgcgggtgcgggacttcggtgacctgctg
gcgccactgttcgaacggcggcgggcggcgcgactgccctga

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