KEGG   Sinorhizobium americanum: SAMCFNEI73_pC0667Help
Entry
SAMCFNEI73_pC0667 CDS       T04621                                 

Definition
(GenBank) ATP-dependent DNA ligase YkoU
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
same  Sinorhizobium americanum
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:same00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    SAMCFNEI73_pC0667
Enzymes [BR:same01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SAMCFNEI73_pC0667
DNA repair and recombination proteins [BR:same03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     SAMCFNEI73_pC0667
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
C:complement(714927..717479)
Genome map
AA seq 850 aa AA seqDB search
MGLETYREKRDFASTPEPKGGKARRSSNSFVVQKHDATRLHYDFRLEMDGVLKSWAVTKG
PSLVPGEKRLAVHVEDHPLEYGEFEGTIPKGEYGGGTVILWDRGTWAPIGDARRGYAKGH
LEFELSGEKLGGRWHLVRMAGKPREKRENWLLIKGDDEAARSEQDPDILEERPESVLTGR
EIKDVAGEEPGWSSKTGRIRKRARGRKAAAPRGQEPEAPSNVPDPAKIKGAKPAPLPDFV
EPSLATLVASAPAGERWLHEIKFDGYRLQARIEAGRTKLLTRGGLDWTKRFGKALVSAVQ
ALPVGTAVIDGEVVVETGSGASDFSGLQADLSEGRSDRFRFYAFDLLYLDGYDLRALPLI
ERKELLGQLISEDEGVIRISSHFEEEGSLVLRHACRLSLEGIVSKLRDAPYRAGRNKSWL
KSKCSARQEFVVAGYVPSTTSRKAIGSLVLGVYEGGKLHHVGRVGTGFTAAVAEGLFKRL
DRLRIPESPFATRLAAEDARQVRYVRPELVAEVEFRAWTADGLLRHASFRGVRDDKPARD
IVREAPKSAAAAPKAPRRTVKLTHPDRLYWPDEGVTKEGLADYYADVWRFVGPHIVGRPL
ALVRCPNGITGEKFFQKHAWKGLNPNIVLINDPKEPPDEQLLSIRDLDGLMGLVQSAVLE
IHPWGSTVADWEGPDTIIMDLDPGEDVPFETVIEAALETAERLKAAGLVPFVKTSGGKGL
HVVAPLKPKAEWPAVKAFTKSIADAMASDSPDRFVSTISKSKRRGKILVDYLRNQRGATA
VAPYSTRARPGAAVSMPLSWDELAPGIGPAYFTVANTPTRLASLHADPWADFRAAAVPLK
EAKAGRKKAA
NT seq 2553 nt NT seq  +upstreamnt  +downstreamnt
atgggcctcgaaacctatcgggaaaagcgcgacttcgcctccacacccgaaccgaagggc
ggcaaagcccgccgatccagcaacagtttcgttgtccagaagcacgacgccacgcggctg
cattacgactttcgcctggagatggacggggtgttgaagagctgggccgtcaccaagggt
ccgagcctcgttcccggcgagaagcgccttgccgttcacgtcgaggaccaccctctcgaa
tacggagagttcgaagggacaatcccgaaaggcgagtatggcggcgggacggtcattctg
tgggatcgcggcacgtgggcgccgatcggcgatgcccggcggggctacgcgaaaggccat
ctcgagttcgagctcagcggcgaaaagctcggcggccgctggcatctggttcgaatggcc
ggcaagccgcgcgaaaaacgggaaaactggctgctgatcaaaggtgacgacgaggcggcg
cgatcggagcaagaccccgatattctcgaggagcggccggagtcggttctgaccggccgc
gagatcaaggatgttgccggcgaagagccgggctggtcgtcgaagaccggccggatacgc
aagcgggctcgcggcaggaaggccgccgctccgcgggggcaggagcccgaggctccttcg
aatgtccccgatcccgcgaagatcaagggcgccaagccggcccccttgccggactttgtc
gagccttcattggcgacgctcgtcgcttccgcgcccgccggcgaacgctggctccacgaa
atcaaattcgacggctaccggttgcaggcgcggatcgaagccgggcgcaccaagcttctc
acccgcggcgggctggactggacgaaaaggttcggcaaggcgctggtgtcggcggtgcag
gcgctaccggtcggaacagctgtgatcgatggcgaggtcgttgtcgaaacgggatccggg
gcctccgacttttccgggttgcaggccgacttgagcgagggtcgcagcgatcgcttccgc
ttctatgcgttcgaccttctctacctcgacggctatgacctgcgcgctctgccgctgatc
gaacgcaaggagctactcggccagttgataagcgaagacgaaggcgtcatccgcatcagc
agccatttcgaagaggaaggcagtctagtgctgcgtcatgcctgcaggctgagcctcgaa
ggcatcgtctcgaagctgcgcgatgcgccctatcgtgccggacggaacaagagctggttg
aaatccaaatgctcggcgcgtcaggagttcgtcgttgccggctacgtgccgtcgacgacc
tcgcgcaaggcgatcggctcgctcgtgctcggcgtctacgagggcggcaagctccatcat
gtgggccgcgtcggaacggggttcaccgcggccgttgcggaggggctcttcaagaggctt
gaccgcttgcggatacccgaaagtccgttcgcaacgcggcttgcggcggaggatgcgcgc
caggtgcgatatgtgaggccggagctggtggccgaggttgagttcagggcctggaccgcc
gacggccttctccgccacgcctcgttcaggggggtgcgggacgataagccggcccgcgac
atcgtgcgcgaagcgcccaagtctgcggccgcagcgccgaaagctccgcgtcggaccgtg
aagctcacccatcccgaccggctctactggccggacgagggcgtgaccaaagaggggctc
gccgattactatgccgatgtctggcgcttcgtcgggccacacatcgtcggtcgcccgctc
gctttggtcagatgccccaacgggatcaccggggagaagttcttccagaagcatgcctgg
aagggcctgaaccccaacatcgtgctcatcaatgatccgaaggagccccccgacgaacag
ctgttgagtatcagagacctcgacggcctgatggggctcgtccagtccgcggttctcgaa
atccatccttggggctcgacggtcgccgattgggaaggaccggacacgatcatcatggac
ctcgaccctggcgaggacgtgccgttcgaaacggtgatcgaagccgcgctcgagacggca
gagcgcctgaaggcggccggccttgttcccttcgtcaagacttccggcggcaaggggctt
cacgtggtggcgccgttgaagccgaaggcggaatggccggcggtcaaagccttcaccaag
tcgattgccgacgcgatggcctccgacagtcctgatcgcttcgtttcgacgatcagcaaa
tccaagcgccgcggcaagatcctggtcgattatttgagaaaccagcgcggcgcgactgcg
gttgcaccctattcgacgcgagcacggccgggcgccgccgtatcgatgcctctgtcctgg
gatgaattggcccccgggatcgggccggcctatttcacggtggcgaacacgccgacgcgg
ctggcgtcactgcacgccgacccgtgggcggattttcgtgcggccgccgttccgctcaag
gaggctaaggccgggcgaaagaaggccgcctga

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