Sinocyclocheilus anshuiensis: 107690887
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Entry
107690887 CDS
T04917
Name
(RefSeq) collagen alpha-2(IV) chain-like
KO
K08127
epiphycan
Organism
sanh
Sinocyclocheilus anshuiensis
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sanh00535
]
107690887
Proteoglycans [BR:
sanh00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
107690887
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
107690887
NCBI-ProteinID:
XP_016344793
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MVTLRLMWGLLVLCVVAASPRRYARQAELDNYDNNNVDLDLNVDGDDVYDYYDGIDEPQI
EIGTLSPDEDIDPSHHASLEEEEEEEVEHEERTVEGREDKELPIKPQLIPSGSGESGTLM
GPSAQGEEELRLTPIDILQISGDFSGSGDLGSGDLLDDKDSGSGEPLGSGGSGASGDISG
SVESEDLGSGVSGLSGSGIILILGGEEELHLTLETIPHEASGDFGESGISWVSGASGLPE
LSGEPSASGVLEVSGEPVASGVPEVSGEPGAFGVPELSGESGASGVPELSGEPGVSGVSE
VSGESGVPEVSGEPGASGVPEMSGESGLSGVPDISGESGTSGVPEVSGESGISGVNEVSG
ESGISGLNEVSGEPVISVLPEFPGKPGNFDLFGESGVPEETKQPEVTFESGESGSLEESG
VTEAPDVTTEILIPDLDEEEEILLTTPTTPLEGTGGDIGSGVPDIDKDIDTDTTGMATCM
LCTCLVGSVYCDDLKLDRVPPLSKETSHFYARYNKITRISKSDFANLNKLKRIDLTSNGI
SRIDDDAFFGLPALEELILRENSIRQLPALPPSMTLIDASHNQLGSTGIQREAFKDMPGL
LYLYLTDNNIDHIPVPLSDSLRSLHLQNNNIQMMHEDTFCNPHDLNYIRNALEDVRLDGN
PINLSRTPQAYICLPRIPVGALI
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggtaacgctgaggttgatgtggggactcctggtcctgtgtgtggtggcagcctctccc
cgcagatacgcccgacaagcagaactagataactatgacaacaacaatgtggatttagac
ctgaatgtggatggtgatgatgtctatgactattacgatggaattgatgaaccacagata
gagattggcaccttgagccctgatgaggatattgatccttcacatcatgcctcattggag
gaggaagaagaggaggaggtggagcatgaagaacggacagttgaggggagagaagacaag
gaattacccataaagcctcagcttattccatcaggctctggggagtcagggactctgatg
ggccctagtgcacagggagaggaggagcttcgtctgacgcccattgacatccttcagatt
tctggggacttttcgggttctggtgacttgggctctggagacttacttgatgacaaagat
tctggttctggagagcctttgggctctggaggttctggggcctctggtgacatatcaggt
tctgtggagtcagaggaccttggttctggagtctctgggctttctggttcaggcataata
ttgatcttaggtggagaggaggagctccacttgacgcttgaaaccattccacacgaggcc
tctggggattttggggagtctggaatctcttgggtgtctggagcttctgggttgcctgag
ctgtcaggagagccttcagcctctggggttcttgaggtatctggagagcctgtggcttct
ggggtacctgaggtatcaggagaacctggggcctttggagtacctgagctgtcaggagag
tctggggcctctggggtacctgagttgtcaggagaacctggggtctctggggtatctgag
gtgtcaggagaatctggggttccagaggtttcaggagagcctggggcctctggcgtacct
gaaatgtcaggagagtctgggctctctggggtgccagacatatcgggagagtctgggacc
tccggggtgcctgaggtgtctggagagtctgggatctctggagtgaatgaggtgtctgga
gagtctgggatctctgggttgaatgaggtgtctggagagcctgtgatctctgtgctgcct
gagttccctggaaagcctggaaactttgatttgtttggagagtctggggtccccgaggag
actaaacagcctgaggtcactttcgagtcaggagagtctgggagcctagaagaatctggg
gtgactgaggccccagacgtcaccactgaaatattaatacctgacttagatgaagaggag
gagatactcctaactaccccgaccactcccttggaggggactgggggtgatatagggtca
ggggtacctgatattgacaaagatattgacacagatacaacaggtatggccacctgtatg
ctctgcacctgcctggttggatctgtgtactgtgatgaccttaagttggaccgtgttcct
cccctctccaaagaaacctctcatttctatgcccgctacaacaaaattactaggatcagc
aagtctgacttcgccaacctgaataaattaaagaggatcgatctgactagcaatggcatt
tccaggattgatgatgatgctttctttggccttcctgctctggaggagttgatattacga
gagaatagtattagacaacttcctgctctgccaccctctatgacccttattgatgcctct
cacaaccagctgggcagcactggcattcagagagaagctttcaaggacatgccagggcta
ctttacctttacttgacagacaacaacatagaccacatcccagttcctttgtctgacagt
ctgcgctctctgcacctacagaataacaatatccaaatgatgcacgaggacaccttctgc
aatccgcatgacttgaattacatccgcaatgctcttgaggatgttcgcctggacggtaat
cccatcaacctcagcagaaccccacaggcctacatatgtttgccacgtatccctgttggt
gcccttatttaa
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