Streptococcus anginosus SA1: DK43_03170
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Entry
DK43_03170 CDS
T03658
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
sans
Streptococcus anginosus SA1
Pathway
sans03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sans00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DK43_03170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sans03019
]
DK43_03170
03009 Ribosome biogenesis [BR:
sans03009
]
DK43_03170
Enzymes [BR:
sans01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
DK43_03170
Messenger RNA biogenesis [BR:
sans03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DK43_03170
Ribosome biogenesis [BR:
sans03009
]
Prokaryotic type
rRNA helicases
DK43_03170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIK77362
LinkDB
All DBs
Position
612007..613563
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AA seq
518 aa
AA seq
DB search
MKFNELHLSAELLAEIEKAGFVEASPIQEQTIPLAMAGKDVIGQAQTGTGKTAAFGFPTL
EKINTENPVVQALVIAPTRELAVQSQEELFRFGRSKGVKVRSVYGGSSIEKQIKALRSGA
HIVVGTPGRLLDLIKRKALKLNHVETLILDEADEMLNMGFLEDIEAIISRVPEERQTLLF
SATMPDAIKRIGVKFMKEPTHVKIAAKELTTELVDQYYIRVKENEKFDTMTRLMDVEQPE
LSIVFGRTKRRVDELTRGLKIRGFRTEGIHGDLDQGKRLRVLRDFKNGNLDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKSGQSITFVAPNEMGYLQVIESLTKK
RMKGMKPATAEEAFQAKKKVALKKIERDFADESIRNQFEKFGKDARKLAAEFTPEELALY
ILTLTVQDPDTLPEVEIAREKPLPFKYVSGANKGNRNSKNGRRSNDRRDRTNGRDNYKKG
GRHDRFDKEKRYRKDHKKPRNTSSEKKTGFVIRNKGDK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttaatgaattacatttgtctgctgaattgttagcagaaattgaaaaagcaggc
tttgttgaagccagtccaatccaagaacaaacaatcccgcttgctatggcagggaaagat
gtgattggacaagctcagactggtacaggaaagacagctgcttttggttttccaactctc
gaaaaaattaacacagaaaatcctgttgttcaggctttagtcattgcaccaactcgtgaa
ttggctgttcaaagtcaagaggaactcttccgctttggtcgaagcaaaggagtgaaagtt
cgctcggtttatggtggatctagcattgaaaagcaaatcaaggctctccgttcaggcgcg
cacattgtcgttggaactccaggacgtttattagacctcattaagcgcaaagcactgaaa
ctcaatcatgtagaaacgctaattttagacgaagcggatgaaatgctcaatatgggtttc
ttagaagacattgaagcaatcatctcacgcgtgccggaagagcgtcagacccttctcttt
tcagctactatgccagatgctatcaagcggattggcgtgaagtttatgaaagagccaaca
catgtcaaaattgcagcaaaagaattgacaacagaactggtggatcaatattatatccgt
gtaaaagaaaatgaaaaatttgataccatgacacgtctcatggatgtggaacaaccagaa
ctttctatcgtttttgggcgtaccaaacgccgagttgatgaattgactcgtggacttaaa
atccgtggtttccgcacagaggggattcatggcgatttagaccaaggaaaacgtctccgt
gttcttcgtgacttcaaaaatggtaatttagatattcttgttgcaacggacgtcgcagca
cgtggattggacatttctggtgtcacacatgtttacaattacgatattccacaagatccc
gaaagttatgtgcatcgtatcggacggacaggtcgtgctgggaaatctggtcaatccatt
acatttgttgcaccaaatgaaatggggtatcttcaagtcattgaaagcttaactaaaaaa
cggatgaaaggtatgaagccagcaacggcagaagaagcctttcaagctaagaaaaaagtt
gcactcaaaaagattgagcgagattttgcagatgaaagtattcgcaaccaatttgaaaag
tttggcaaagacgctcgcaagctggcagctgaatttacaccggaggaattggctttatat
atattgaccttaaccgtacaagatccagacactctaccagaagtagaaattgcgcgtgaa
aagccattaccatttaagtatgtttcgggagctaataaaggcaatcgtaacagcaaaaat
gggcgtcgtagtaatgatcgtcgtgaccgtactaatgggcgtgacaattacaaaaagggt
ggtcgccacgatcgctttgacaaagaaaagcgttaccgcaaagaccacaaaaaacctcgt
aatacttcaagtgagaagaaaacaggatttgtcatccgtaataaaggtgataagtaa
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