KEGG   Spiroplasma apis: SAPIS_v1c00590
Entry
SAPIS_v1c00590    CDS       T02945                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
sapi  Spiroplasma apis
Pathway
sapi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sapi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SAPIS_v1c00590 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sapi03400]
    SAPIS_v1c00590 (uvrB)
DNA repair and recombination proteins [BR:sapi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SAPIS_v1c00590 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SAPIS_v1c00590 (uvrB)
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII UVR DEAD DUF87 P-loop_SecA AAA_7 AAA_30 TrwB_AAD_bind AAA_16 AAA_22 SpoIVA_ATPase Kinesin UB2H AAA DUF5834 NPFF HerA_C T6SS_VipA AAA_25 AI2M-like_HNH AAA_19
Other DBs
NCBI-ProteinID: AHB35906
UniProt: V5RIH0
LinkDB
Position
59378..61354
AA seq 658 aa
MAKTFKEFDLVTNFKPGGDQPKAIEALINGLKEGKKHQVLLGATGTGKTFTMANIIKEMN
KPTLVLAHNKTLAMQLYIEFKELFPNNRVEYFVSNFDFYQPEAYIPARDLYIDKDAKRNN
DLEMMRLSTMNALMLRTDTIVVASVAAIYATQDPKEYGEVFFELAVGQSISKKQLLTFLV
QTGYVRNETHLDMGCFSAKGDVIKIAPSWTDDYNIRISMFGNEIEAIDILDVLNNTVKES
LRMFTVFPASSYVTDFDKMKLVIKNIEKELEGRVKELLDQGKVLEADRLDKRTRYDLELL
SEFGMCSGIENYSAHIDFRAPGTPPYSLVDYFGEDFLTIIDESHMMIPQIKGMFNTDRSR
KETLVNHGFRLPSALDNRPLNFEEFTGKLQSVIYTSATPGDYELELTNGVVTEQIIRPTG
LVDPVIEVWPTTNQMENIITEIHKVSAKKQKVFITSLTIKQSEDITSFLQDRNIKVAYLH
SELKTLERNQVLLDLRKGVYDVIVGVNLLREGLDIPEVSLVCILDADKQGFLRNTRSLIQ
TVGRAARNSEGRVIFFADKISQAMEEAMQETKRRRDKQIAFNKANNIVPQTIVKKISDIG
SSVNIRNKIKELKGKNSKEKAEEKIIADLRKEMLLAAKEQNYEKAAELRDIILELQAL
NT seq 1977 nt   +upstreamnt  +downstreamnt
atggcaaaaacatttaaagaatttgacttggtaacaaacttcaaaccgggtggagaccaa
ccaaaagcaatagaagctttaataaatggtttgaaggaaggaaaaaaacatcaagttttg
ttaggtgcaactggaacgggtaaaacatttacaatggcaaatatcatcaaagaaatgaat
aaacccacattagtattagctcacaataaaacattagctatgcagttatatatagagttc
aaagagttatttccaaataatagagtggaatattttgtatcaaactttgacttttatcaa
ccagaggcttacatacctgcaagagatttatatatagataaggatgctaaaagaaataat
gatttagagatgatgcgattaagcactatgaatgctttaatgcttagaacagacacaatt
gttgttgcatctgtcgctgcaatttatgccacacaagatccaaaagagtatggtgaggtt
ttttttgagttagcagttggtcaatctatttctaaaaaacagttattaacatttttagtt
cagactggttatgtaagaaatgagacccacttagatatgggttgttttagcgccaaaggt
gatgtaattaaaattgctccaagttggacagatgattataatattagaatatcaatgttt
ggaaatgaaattgaagcaatagatattcttgatgttttaaacaatactgttaaagaaagt
ttgagaatgttcacagtatttccggcttcgtcatatgtaacagattttgataagatgaaa
cttgtcattaaaaacattgaaaaagaacttgaaggtcgtgtaaaggagttgcttgatcaa
ggaaaagttttagaagcagatcgcctagataaaagaacaagatacgatttagaattgctt
agtgaatttggaatgtgtagtggtattgaaaactattctgcgcatattgactttagagca
ccaggaacacctccgtatagtttggtagattattttggagaagatttcttaactattata
gatgagtcgcatatgatgattcctcaaataaaagggatgtttaatacagatagaagtaga
aaagaaacattagtaaatcacggttttagattaccaagtgcattggataataggcccttg
aactttgaagagttcactggaaaactccaaagcgtaatttacacttcagctactcctggt
gattatgagttagaattaacaaatggggtagttactgaacaaattattagaccaacagga
ctagtagaccctgtcatcgaagtttgaccaaccacaaatcaaatggaaaatataattaca
gaaatacataaagtatctgctaagaagcaaaaagtgttcataacttctcttacaataaaa
cagtccgaagacatcacctcatttttacaagatagaaatattaaagtggcatatcttcac
tctgaacttaaaactttagaaagaaatcaagtgcttttagatcttcgaaaaggagtttac
gatgttattgttggtgtcaacttactaagagaaggattagacatacctgaagttagtctt
gtgtgtattttagacgcagacaaacaaggatttttgagaaacacaagaagtttgatacaa
acagttggtagagctgcacgtaactcagaaggtagagttatattttttgcagataaaatc
tcacaagccatggaagaggctatgcaagagacaaaaagaagaagagataaacaaatcgct
tttaacaaggccaataatattgtgcctcaaacaattgtaaaaaaaataagtgatattggt
tcttctgtaaatataagaaacaaaattaaagagcttaaaggaaaaaatagtaaagaaaaa
gccgaagaaaaaattattgctgatcttagaaaagaaatgcttttggcagcaaaagaacaa
aattatgaaaaagcagcagaattaagagatataatcttagaactacaagctttatag

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