Spiroplasma apis: SAPIS_v1c00590
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Entry
SAPIS_v1c00590 CDS
T02945
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
sapi
Spiroplasma apis
Pathway
sapi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sapi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SAPIS_v1c00590 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sapi03400
]
SAPIS_v1c00590 (uvrB)
DNA repair and recombination proteins [BR:
sapi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAPIS_v1c00590 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SAPIS_v1c00590 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
DUF87
P-loop_SecA
AAA_7
AAA_30
TrwB_AAD_bind
AAA_16
AAA_22
SpoIVA_ATPase
Kinesin
UB2H
AAA
DUF5834
NPFF
HerA_C
T6SS_VipA
AAA_25
AI2M-like_HNH
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AHB35906
UniProt:
V5RIH0
LinkDB
All DBs
Position
59378..61354
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AA seq
658 aa
AA seq
DB search
MAKTFKEFDLVTNFKPGGDQPKAIEALINGLKEGKKHQVLLGATGTGKTFTMANIIKEMN
KPTLVLAHNKTLAMQLYIEFKELFPNNRVEYFVSNFDFYQPEAYIPARDLYIDKDAKRNN
DLEMMRLSTMNALMLRTDTIVVASVAAIYATQDPKEYGEVFFELAVGQSISKKQLLTFLV
QTGYVRNETHLDMGCFSAKGDVIKIAPSWTDDYNIRISMFGNEIEAIDILDVLNNTVKES
LRMFTVFPASSYVTDFDKMKLVIKNIEKELEGRVKELLDQGKVLEADRLDKRTRYDLELL
SEFGMCSGIENYSAHIDFRAPGTPPYSLVDYFGEDFLTIIDESHMMIPQIKGMFNTDRSR
KETLVNHGFRLPSALDNRPLNFEEFTGKLQSVIYTSATPGDYELELTNGVVTEQIIRPTG
LVDPVIEVWPTTNQMENIITEIHKVSAKKQKVFITSLTIKQSEDITSFLQDRNIKVAYLH
SELKTLERNQVLLDLRKGVYDVIVGVNLLREGLDIPEVSLVCILDADKQGFLRNTRSLIQ
TVGRAARNSEGRVIFFADKISQAMEEAMQETKRRRDKQIAFNKANNIVPQTIVKKISDIG
SSVNIRNKIKELKGKNSKEKAEEKIIADLRKEMLLAAKEQNYEKAAELRDIILELQAL
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaacatttaaagaatttgacttggtaacaaacttcaaaccgggtggagaccaa
ccaaaagcaatagaagctttaataaatggtttgaaggaaggaaaaaaacatcaagttttg
ttaggtgcaactggaacgggtaaaacatttacaatggcaaatatcatcaaagaaatgaat
aaacccacattagtattagctcacaataaaacattagctatgcagttatatatagagttc
aaagagttatttccaaataatagagtggaatattttgtatcaaactttgacttttatcaa
ccagaggcttacatacctgcaagagatttatatatagataaggatgctaaaagaaataat
gatttagagatgatgcgattaagcactatgaatgctttaatgcttagaacagacacaatt
gttgttgcatctgtcgctgcaatttatgccacacaagatccaaaagagtatggtgaggtt
ttttttgagttagcagttggtcaatctatttctaaaaaacagttattaacatttttagtt
cagactggttatgtaagaaatgagacccacttagatatgggttgttttagcgccaaaggt
gatgtaattaaaattgctccaagttggacagatgattataatattagaatatcaatgttt
ggaaatgaaattgaagcaatagatattcttgatgttttaaacaatactgttaaagaaagt
ttgagaatgttcacagtatttccggcttcgtcatatgtaacagattttgataagatgaaa
cttgtcattaaaaacattgaaaaagaacttgaaggtcgtgtaaaggagttgcttgatcaa
ggaaaagttttagaagcagatcgcctagataaaagaacaagatacgatttagaattgctt
agtgaatttggaatgtgtagtggtattgaaaactattctgcgcatattgactttagagca
ccaggaacacctccgtatagtttggtagattattttggagaagatttcttaactattata
gatgagtcgcatatgatgattcctcaaataaaagggatgtttaatacagatagaagtaga
aaagaaacattagtaaatcacggttttagattaccaagtgcattggataataggcccttg
aactttgaagagttcactggaaaactccaaagcgtaatttacacttcagctactcctggt
gattatgagttagaattaacaaatggggtagttactgaacaaattattagaccaacagga
ctagtagaccctgtcatcgaagtttgaccaaccacaaatcaaatggaaaatataattaca
gaaatacataaagtatctgctaagaagcaaaaagtgttcataacttctcttacaataaaa
cagtccgaagacatcacctcatttttacaagatagaaatattaaagtggcatatcttcac
tctgaacttaaaactttagaaagaaatcaagtgcttttagatcttcgaaaaggagtttac
gatgttattgttggtgtcaacttactaagagaaggattagacatacctgaagttagtctt
gtgtgtattttagacgcagacaaacaaggatttttgagaaacacaagaagtttgatacaa
acagttggtagagctgcacgtaactcagaaggtagagttatattttttgcagataaaatc
tcacaagccatggaagaggctatgcaagagacaaaaagaagaagagataaacaaatcgct
tttaacaaggccaataatattgtgcctcaaacaattgtaaaaaaaataagtgatattggt
tcttctgtaaatataagaaacaaaattaaagagcttaaaggaaaaaatagtaaagaaaaa
gccgaagaaaaaattattgctgatcttagaaaagaaatgcttttggcagcaaaagaacaa
aattatgaaaaagcagcagaattaagagatataatcttagaactacaagctttatag
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