KEGG   Salmo salar (Atlantic salmon): 106572925Help
Entry
106572925         CDS       T04363                                 

Gene name
hdac6
Definition
(RefSeq) histone deacetylase 6
  KO
K11407  
histone deacetylase 6 [EC:3.5.1.98]
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
Enzymes [BR:sasa01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     106572925 (hdac6)
Protein phosphatases and associated proteins [BR:sasa01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     106572925 (hdac6)
Messenger RNA biogenesis [BR:sasa03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     106572925 (hdac6)
Chromosome [BR:sasa03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     106572925 (hdac6)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
ssa15
AA seq 1115 aa AA seqDB search
MDSVPETRSVRRSPRTSKSPDNNAAKKESGKARKKTSNLQETRRRGRMDRSKGEEDIANQ
LNNLDLCNEASATGTGLVFDNMFTRHYCLWDPSHPECPERVTTIMDMVEKQGLLSRCVTV
EARAASNEELRLVHTKEHVDLMRSTQHMDEDQLKTLADSYDSVYIHPESYTCASLAVGSV
LQLVDKVMTSELQNGFSVARPPGHHAQVDQMNGYCMFNNLAIAARYAQTHHRVERVLIVD
WDVHHGQGIQYIFQEDPSVLYFSVHRYEEGLFWPHLPESDSSAVGTGSGEGYNINLPWNK
IGMKDADYVAAFQQLLLPVAYEFQPQLVLVAAGFDSVIGHPKGEMSASPQCFSVLTHMLL
GLAQGKLLLVLEGGYNLQSTAEGVCACLRSLLGESCPRLGSPSIPSDSALKSISRSISAL
YPYWTSLQVLEGGPLSDSDPLTPALTPAESSEELCEERRDSLDLTTGLVYDQRMMEHHNI
WDSHHPELPQRIQRIFSRHEDLGLVSRCLRIPARLALEEELALCHSLEHIAKIKATEGMK
TRDLHRLGDEYNSIFISTESYRSARLAAGACFNAVQAVLTGQVRNGVAIVRPPGHHAEKD
AACGFCFFNTAALTARYAQSISQQPLRVLILDWDVHHGNGTQHIFEEDDSVLYISLHRYE
DGTFFPTSEDAHYNRVGKGKGTGFNVNIPWNGAKMGDAEYLAAFHSVVMPIAREFDPGLV
LVSAGFDAARGDPLGGYQVTPPGYAHLTHLLMGLAGGRVLVILEGGYNLTAISESMSACT
SILLGDPALPLPPLVPPHPNAAVSINKVIRTHSAYWLSLRIQLPESLRLSLPNPKPRGKR
TSKGKKSPRQRNQGGTSPGQGSPQTPSQTPSQTTPLPSGGRGDLDLDDLTKGLVSLDLNQ
STSANPSPASVPVGGARSKVRFSPTKSPVKEVKTEAVPNTPEILQPTPDKTETQAVAMAA
SDPVTKGDQESGAATVEVEGASGYSKEPVFELFCGNQDVDGSTMYVVDPLSWCPHLDSVK
PVPAGGIDVFRPCEDCGTDTENWICLCCYKVYCGRYVNQHMVTHGLVSEHRLVLSFADLS
VWCYSCQAYVHNQMVFEAKNAAHCMKFGEDMPLSN
NT seq 3346 nt NT seq  +upstreamnt  +downstreamnt
atggattctgtgccagagaccaggtcagtcagacgttcccctcgcacgtcaaagtcaccg
gacaacaacgcagccaaaaaggagagcggcaaggcccgcaagaagacgagcaacctgcag
gagactcggaggagaggaagaatggacagaagtaaaggagaagaggacatagccaatcaa
ctgaacaacctggatctgtgtaacgaggcttcagccacagggactggtctggtgttcgac
aacatgttcacccgccattactgtctttgggatcccagccatccagaatgcccagagaga
gtgaccaccataatggacatggtggagaaacagggactgctgtcccgctgtgttacagtg
gaggcgagggctgcgtctaacgaagagttgcgcttagttcacacgaaggagcatgtagat
ctgatgaggtctactcagcatatggatgaagaccagctgaagacactggctgactcctat
gactcggtctacatccaccctgagtcatatacgtgtgccagtctggctgtgggctctgtt
ctgcagctggttgacaaggtcatgacctcagagctccagaatggattctctgttgctaga
cctccaggccaccacgcccaggtagaccagatgaacggttactgtatgtttaataatctg
gccatcgcagcgcgctacgcacagacacaccatcgggtggaacgagttctgatagtggac
tgggatgtgcatcatggccaggggatccagtacattttccaggaggatcccagcgttctg
tacttctcagtccacagatatgaggagggtttgttctggccccatctgcccgagtcagac
agcagtgctgtgggcaccggttctggagagggatacaacatcaacctgccctggaataag
attggaatgaaagatgcagactacgttgcagcattccagcagcttcttttacctgtagcc
tatgagttccagcctcagcttgtcctggtggcagcaggttttgactctgtgataggtcat
cccaagggggagatgtctgccagtcctcagtgtttctctgttctgactcacatgctgctg
ggtctggctcaggggaagttgctgctggttctggagggcggatataacctgcagtccaca
gcagagggagtgtgtgcctgtctgaggtcactattgggggagtcctgcccccgcctgggg
tcaccatccatcccgagtgacagtgccctgaaatccatctccaggtctatctctgctctg
tacccttactggaccagtctgcaggtactggagggaggtcctctatcagacagcgacccc
ctgaccccagccctgaccccagcagagagcagtgaagagctctgtgaggagagaagagac
agcttggacctgaccacgggcctggtgtacgaccagaggatgatggaacaccacaacatt
tgggacagccaccacccagagcttccccagaggatccagagaatcttctcccgtcatgag
gacctgggcttggtgtcccgttgcctgaggataccggctcgacttgccttagaggaggag
ctggctctgtgccacagcttggagcacatagccaagatcaaggccacagaggggatgaag
acgagagaccttcacagactgggagatgagtacaactctatcttcatcagtactgagagc
tacaggagcgcccggctggctgctggggcctgctttaatgcagtacaggctgttctgact
ggacaggtccgtaatggtgtggccatcgtgcgcccccctggtcaccatgccgagaaggac
gctgcctgtgggttctgtttcttcaacactgccgccctgactgcccgatacgcccagtcc
atctcccagcagcccctgcgggtcctcatcctggactgggatgttcaccatggcaacgga
acacagcacatcttcgaagaggatgacagtgtcctatacatctccctgcatcgctacgag
gatgggaccttcttccctacttcagaggatgcacactacaacagagtgggcaaggggaag
ggaacagggttcaacgtcaacatcccctggaacggagccaagatgggcgacgcagagtac
ctggctgccttccactcagtggtcatgcccatcgctagagagtttgacccaggcctggtg
ctggtatcggcagggtttgatgcagccagaggggaccctcttggagggtaccaggtgacc
cccccgggctatgcccatctcacccatctcctgatgggactggcaggcggcagagtcctg
gtcatcctggagggtggttataacctgactgccatctctgagtctatgtctgcctgcacc
agcattctcctgggagaccccgctctgcctctgcctcccttggtcccgcctcaccccaac
gcagcagtcagcatcaacaaggtcatacgcacccactccgcctattggctgtccctcagg
atacaacttccagagtctctccgcctgtctctgccaaaccccaaacccagaggaaagagg
acttctaagggcaagaagtctcccagacagcgtaaccagggcgggaccagccctggtcag
gggtcacctcagaccccatctcagaccccatctcagaccacacctctgccctctgggggt
cggggcgaccttgacctagatgacctcacgaagggactggtgtcactcgacctaaaccaa
agtacctcagccaatcccagcccagcgtctgtccctgtgggtggagccaggtcgaaggta
aggttcagtcctacgaagagccctgttaaggaggttaagactgaagctgttccaaatacg
cccgagattctccaaccaacgcctgacaagacagagacgcaggcggtcgccatggctgcc
tcagacccagttaccaagggagaccaggagagcggtgctgcgacggtggaggtggaaggg
gcgtctggttactccaaggagccggtgtttgagctgttctgtggaaaccaggatgtggac
gggagcactatgtacgtggtggatcccctgtcctggtgcccccacctagactcagtgaag
cctgttcctgctggagggatagatgtgtttcggccctgtgaggattgtgggaccgacact
gagaactggatctgtctctgctgttacaaggtgtactgtggtcgctacgtcaaccagcac
atggtaacccacggcttggtgtcagaacatcgtctggtgctgagcttcgctgacctgtct
gtctggtgttattcctgtcaggcctacgtccacaaccagatggtgtttgaagccaagaac
gctgcccactgtatgaagtttggagaggacatgcccctctctaact

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