Salmo salar (Atlantic salmon): 106603419
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Entry
106603419 CDS
T04363
Name
(RefSeq) homeobox protein cut-like 1
KO
K09313
homeobox protein cut-like
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106603419
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
106603419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
106603419
NCBI-ProteinID:
XP_014052573
UniProt:
A0A1S3RJY6
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All DBs
Position
ssa04:54173895..54349807
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AA seq
1542 aa
AA seq
DB search
MNRSSRQRQANVERREEGTRELNATATALANRQDESEQSRKKLIDQSREFKKNTPEDLRK
QVAPLLKGFQAEIDAVSKRSKESEAAFLNVYKRFIDVPDPVSALETAQQLQLKVQRMHDI
ETENQKLRETLEGYTQEIAEVKNHEVTIKALKEKIEEYEETLSKQAKELGQEERRGGEKE
AKEGQLHNDHAEEESQQQENQESVVSKLEEANHKAQSLQTALEATQTELLELKSKYDEES
TAKADEIEVVMSDLKRANQRAEEAEREAEALREQLSSANKSLQLATQIQKAPDMEQALEV
LSRSSLEVELSAKEREVLQLAEDVQRLQASLANIRENSASQISQLEQQLSTKESLLKQLE
EKLREQADYEAIKKELSILKSMEFGSSNFSSAQDSKKPLEMLLKSRGLQSESSSLRLNNS
ELSGVRERKVKDSPEGQQRLPATPMGTNLQGSPPPPSSQLLLRTGSGGSSDTTPVTTANG
THHFSPTGGGLGGQDFFSPSSLASAGTAFPLAGKVSLNSLLQRQLMQTFYSKALQDSVSG
QALLFSPAHYPTPNSLSASPLPPHQSLQSQSQHPSAGSPDVNGLAPSPSQSEGAGSVSEG
EDMDTSEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWSKLTIRGKEPFH
KMRQFLSDEQNILALRSIQGRQRENPGQNLNRVFQEVPKRRTGSEGSSRAGNITTRIRTP
ESGSDEAIKSILEQAKRELQVQKADGVDNRQRRQTGYPRGMGNYFAKYAQSLRLVSLPAV
DSSQTPPSSSIGGGGSIGSGGSSSSDETIRSILEQARREMEAQQAALEPILKPSSMGPSD
LALLSPKLLGASTLPASYSPLALSLKKPSIPPSSSPSSLLDFHSAMVKEAGTVVVGEGGG
GGGSLMDGGTKQGRGSWRDQWWNSMHPGGRGVTSSMNDDARSQEDSKEKPPRLAGSSSAL
APFSSSVSISSPDCWKDWPRAESPYSQADSEPGGGTNTQGPSRANTPQSSPSPLPLSLSL
GPLGSLLTPAAKPVKPVVAPLTPEQYEVYMYQEVDTAELTQQVKDKLAKNGICQRIFGEK
VLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQNVLPLQGQPQENTPKTS
ASCSPAPESPLSSAEESVKSLGEQVGGEGCGGGGGLSQFPPREPSEPSESQPGTPLPVPG
HSGLSIQEMVAMSPELDTYVITKKVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKP
WHKLSLKGREPFVRMQLWLQDPRNVEKLMDMKRMEKKAYMKRRHSSVSESQTADSGGLSG
GDFSQGGSPQHGLGHHLHQQQPPQQHLKKARVVLAPEEKEALKRAYQQKPYPSPKTIEEL
ASQLNLKTSTVINWFHNYRSRIRRELFIEEIQRGEGGEGVSPSTRAGKASEGDSCDGTES
DGTVEGTRPGHEHHPASEGEWGSDHRDEGTTLATGSTAAGTSGSLFSFPEISHVSSVSLA
ATAAARNPRDNSLRKKKAANLNNIIHRLEKAASKDEPHEWEF
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcagcagcaggcagcgccaggcgaatgtggagaggagagaggaaggaacgaga
gaactgaatgccacagccacagccctggccaacagacaagatgagagcgagcagtccagg
aaaaagctaatcgaccagagccgcgagttcaagaaaaacacaccagaggatctgcgaaag
caggtagctccattgctaaagggcttccaagcagagatcgacgcagtgagtaaaagaagt
aaggagtcagaggctgccttcctaaacgtgtacaagagattcatcgatgtcccagaccct
gtgtcggccctggagactgcccagcagctacagctgaaggtccagaggatgcacgacatc
gagacggagaaccagaagctccgcgagacgctggagggctacacccaggagatcgctgag
gtcaagaaccacgaggtcacaattaaagcacttaaggagaagatagaggagtatgaagag
accctgagtaaacaggccaaggagctgggccaggaggagaggagagggggagaaaaggag
gcgaaagaggggcagcttcacaacgaccatgcagaggaggagagtcaacaacaggaaaac
caggagtctgtggtgtcaaagctggaggaggcaaaccataaggcccagtccctacagaca
gcacttgaagcaactcagacagagcttttggaactgaagagcaagtatgacgaagagtcg
acagcaaaggccgatgagattgaagtggtgatgtcagacctgaagagagccaatcagaga
gctgaggaagcggagagagaagcagaggctcttcgggaacagctgtcgtccgccaacaag
tccctccagcttgccacacagatccaaaaggcccctgacatggagcaggccctggaggtt
ctgtcgcgctccagtctggaggtggagctgagtgccaaggagcgggaggtgctgcagcta
gccgaggatgtgcagagactgcaggctagcttggccaacatccgggagaattctgcctcg
cagataagccagctggagcagcagctcagcaccaaggagagcttactcaagcaactggag
gagaaactgcgagagcaggcagactacgaagccatcaagaaagagctcagtatcctaaag
tccatggagtttggctcttcaaacttctcctcagcacaggactctaagaagcctctggag
atgttgttgaagagtcgaggcctgcagtctgagagctcctccctgcgcctaaacaacagt
gagctgagtggtgtgagggagcgaaaggtcaaagactcaccagagggtcaacagcgtctt
cctgccacgcccatgggcaccaacttgcagggctcccctccccctccctcctctcaactc
ctcctgcgcactggctcaggtggttcctccgacaccacccctgtcaccaccgccaatggc
acgcaccacttctcgcccacgggcggcgggcttggcgggcaggacttcttcagcccctcc
tcgctggcgtcggcaggcaccgctttccccctggcgggcaaagtgtcgctcaattccctg
ctacagcgccagctcatgcagaccttctactccaaagccctgcaggactcagtgtctggc
caggccctgctcttctcccctgcccactacccaacccctaactccctctcagccagccct
ctgccaccccatcagtcattgcagtcgcaatcccagcatccgtcagcgggcagcccagac
gttaatggcctagccccctcgcccagccagtcagagggtgcagggagtgtctcggaaggt
gaagacatggacacatctgagatagcgcgtcaggtcaaggagcagctgatcaagcacaac
attgggcagaggatcttcggccactacgtgctggggttgtcccagggttcggtcagtgag
atactggctaggcccaagccctggagcaagctgaccatcaggggcaaggagcccttccac
aagatgaggcagttcctatctgacgagcagaacatcttggcactgcgcagcatccagggg
aggcagagagagaacccaggccagaacctgaacagagtgtttcaggaggttccgaagcga
agaaccggctccgaaggctcctcgagggcaggtaacatcaccacgcggatccgtactccg
gagagtgggtcagacgaggccatcaagtccatcctggagcaggccaagagagagctgcag
gtccagaaggctgatggtgtggacaacagacagcgacgacagacaggttacccccgaggc
atgggcaactatttcgcaaaatatgcacaaagtctcagactcgtctctctccctgcagtg
gactcgtctcagacccctccctcgtccagcattggtgggggtggtagtatcggctcaggt
ggatcctccagctcagacgagaccatccgctccatcctagagcaggcaaggagggagatg
gaggcccagcaggccgccctggagcccatcctcaagccctcctccatgggcccctctgac
ctggccctgctctctcctaaactcctgggcgcttccactctcccggcctcctactcaccc
ctggccctctccctcaagaagccctccatccccccatcctcctcgccctcctccctcctg
gacttccactctgccatggtgaaggaggcaggaacggtggtggtgggagaaggcggggga
ggaggagggtctctaatggacggagggaccaagcaggggcggggctcctggagggaccaa
tggtggaatagtatgcaccccggggggcggggagtcacgtctagcatgaacgacgacgcg
cggagtcaggaggacagcaaggagaagcctccccggctggccggctcgtcctcggcgctg
gcccccttctcctcctccgtctccatctcctccccggactgctggaaggactggccccgg
gccgagtccccatactcccaggctgactccgagcccggcggaggcaccaacacccagggg
cccagccgcgccaacaccccccagagcagcccctctcccctgcccctgtccttgagcctg
gggcccctgggttccctgttgacacccgcagccaaaccagtcaagccggtggtggcgccg
ctcacgcctgagcagtacgaggtctacatgtaccaggaggtggacacggccgagctcacg
cagcaggtcaaggacaagctggccaagaacggcatctgccagcgcatctttggagagaag
gtgctgggcctatctcagggtagtgttagtgacatgctgtccaggcccaagccctggagt
aagctgacccagaagggccgggagccctttatccgtatgcagctgtggctcaatggagag
ctgggccagaacgtcctgcccttacagggccagccacaagagaacaccccaaagacctca
gccagctgcagcccagcaccggagtcacccctcagctcggccgaggagtcagtgaagagc
ttgggggagcaggtgggaggagagggatgtgggggtggaggagggttgtcccagttcccc
cccagggaacccagcgagccctctgagtcccagcccggcacaccgctgcccgtccccggt
cactcaggtctcagcatccaggagatggtggccatgtccccggagctggacacctacgtc
atcaccaagaaggttaaggaggtgctgacggataacaacctcggtcagcgtctatttggg
gagaccatcttgggtctgacccagggctcggtgtctgacctgctggcgaggcccaagccc
tggcacaagctcagtctgaagggacgtgagcccttcgtccgcatgcagctctggcttcag
gatccacgcaacgtggagaaactcatggacatgaaacgcatggagaagaaagcctacatg
aagcggcgccacagctcggtgagcgagagccagacggcggacagtgggggcttgtcgggg
ggagacttcagccaggggggcagcccccagcacggcctcggccaccacctgcaccagcaa
cagcccccccagcagcacctgaagaaggctcgtgtggtgctggcccccgaggagaaggag
gccctgaagagggcctatcagcagaagccctacccctcgcccaagaccattgaggagctg
gcgtcacagctcaacctcaagactagcaccgtcatcaactggttccacaactataggtct
cgtatccgacgggagctgttcattgaggaaatccagcgaggtgagggcggtgagggtgtc
tccccatccaccagagcgggcaaggccagcgagggcgacagctgtgacggcaccgagtcg
gacggcacggtggagggcacacgccccggccacgagcaccacccagcctcagagggcgag
tgggggtccgaccacagggacgagggaactaccttggccactggcagcaccgccgcaggt
accagcggcagcctgttcagcttccccgagatcagccatgtttcctctgtgtccttggct
gctaccgccgctgcccgcaacccccgcgacaacagcctgcgcaagaagaaagccgccaac
cttaataatatcatccaccgtctggagaaggccgcaagtaaagacgagccccatgagtgg
gagttctaa
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integrated database retrieval system