KEGG   Salmo salar (Atlantic salmon): 106603419
Entry
106603419         CDS       T04363                                 
Name
(RefSeq) homeobox protein cut-like 1
  KO
K09313  homeobox protein cut-like
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sasa03000]
    106603419
Transcription factors [BR:sasa03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain CUT
    106603419
SSDB
Motif
Pfam: CUT Homeodomain Homeobox_KN
Other DBs
NCBI-GeneID: 106603419
NCBI-ProteinID: XP_014052573
UniProt: A0A1S3RJY6
LinkDB
Position
ssa04:54173895..54349807
AA seq 1542 aa
MNRSSRQRQANVERREEGTRELNATATALANRQDESEQSRKKLIDQSREFKKNTPEDLRK
QVAPLLKGFQAEIDAVSKRSKESEAAFLNVYKRFIDVPDPVSALETAQQLQLKVQRMHDI
ETENQKLRETLEGYTQEIAEVKNHEVTIKALKEKIEEYEETLSKQAKELGQEERRGGEKE
AKEGQLHNDHAEEESQQQENQESVVSKLEEANHKAQSLQTALEATQTELLELKSKYDEES
TAKADEIEVVMSDLKRANQRAEEAEREAEALREQLSSANKSLQLATQIQKAPDMEQALEV
LSRSSLEVELSAKEREVLQLAEDVQRLQASLANIRENSASQISQLEQQLSTKESLLKQLE
EKLREQADYEAIKKELSILKSMEFGSSNFSSAQDSKKPLEMLLKSRGLQSESSSLRLNNS
ELSGVRERKVKDSPEGQQRLPATPMGTNLQGSPPPPSSQLLLRTGSGGSSDTTPVTTANG
THHFSPTGGGLGGQDFFSPSSLASAGTAFPLAGKVSLNSLLQRQLMQTFYSKALQDSVSG
QALLFSPAHYPTPNSLSASPLPPHQSLQSQSQHPSAGSPDVNGLAPSPSQSEGAGSVSEG
EDMDTSEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWSKLTIRGKEPFH
KMRQFLSDEQNILALRSIQGRQRENPGQNLNRVFQEVPKRRTGSEGSSRAGNITTRIRTP
ESGSDEAIKSILEQAKRELQVQKADGVDNRQRRQTGYPRGMGNYFAKYAQSLRLVSLPAV
DSSQTPPSSSIGGGGSIGSGGSSSSDETIRSILEQARREMEAQQAALEPILKPSSMGPSD
LALLSPKLLGASTLPASYSPLALSLKKPSIPPSSSPSSLLDFHSAMVKEAGTVVVGEGGG
GGGSLMDGGTKQGRGSWRDQWWNSMHPGGRGVTSSMNDDARSQEDSKEKPPRLAGSSSAL
APFSSSVSISSPDCWKDWPRAESPYSQADSEPGGGTNTQGPSRANTPQSSPSPLPLSLSL
GPLGSLLTPAAKPVKPVVAPLTPEQYEVYMYQEVDTAELTQQVKDKLAKNGICQRIFGEK
VLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQNVLPLQGQPQENTPKTS
ASCSPAPESPLSSAEESVKSLGEQVGGEGCGGGGGLSQFPPREPSEPSESQPGTPLPVPG
HSGLSIQEMVAMSPELDTYVITKKVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKP
WHKLSLKGREPFVRMQLWLQDPRNVEKLMDMKRMEKKAYMKRRHSSVSESQTADSGGLSG
GDFSQGGSPQHGLGHHLHQQQPPQQHLKKARVVLAPEEKEALKRAYQQKPYPSPKTIEEL
ASQLNLKTSTVINWFHNYRSRIRRELFIEEIQRGEGGEGVSPSTRAGKASEGDSCDGTES
DGTVEGTRPGHEHHPASEGEWGSDHRDEGTTLATGSTAAGTSGSLFSFPEISHVSSVSLA
ATAAARNPRDNSLRKKKAANLNNIIHRLEKAASKDEPHEWEF
NT seq 4629 nt   +upstreamnt  +downstreamnt
atgaatcgcagcagcaggcagcgccaggcgaatgtggagaggagagaggaaggaacgaga
gaactgaatgccacagccacagccctggccaacagacaagatgagagcgagcagtccagg
aaaaagctaatcgaccagagccgcgagttcaagaaaaacacaccagaggatctgcgaaag
caggtagctccattgctaaagggcttccaagcagagatcgacgcagtgagtaaaagaagt
aaggagtcagaggctgccttcctaaacgtgtacaagagattcatcgatgtcccagaccct
gtgtcggccctggagactgcccagcagctacagctgaaggtccagaggatgcacgacatc
gagacggagaaccagaagctccgcgagacgctggagggctacacccaggagatcgctgag
gtcaagaaccacgaggtcacaattaaagcacttaaggagaagatagaggagtatgaagag
accctgagtaaacaggccaaggagctgggccaggaggagaggagagggggagaaaaggag
gcgaaagaggggcagcttcacaacgaccatgcagaggaggagagtcaacaacaggaaaac
caggagtctgtggtgtcaaagctggaggaggcaaaccataaggcccagtccctacagaca
gcacttgaagcaactcagacagagcttttggaactgaagagcaagtatgacgaagagtcg
acagcaaaggccgatgagattgaagtggtgatgtcagacctgaagagagccaatcagaga
gctgaggaagcggagagagaagcagaggctcttcgggaacagctgtcgtccgccaacaag
tccctccagcttgccacacagatccaaaaggcccctgacatggagcaggccctggaggtt
ctgtcgcgctccagtctggaggtggagctgagtgccaaggagcgggaggtgctgcagcta
gccgaggatgtgcagagactgcaggctagcttggccaacatccgggagaattctgcctcg
cagataagccagctggagcagcagctcagcaccaaggagagcttactcaagcaactggag
gagaaactgcgagagcaggcagactacgaagccatcaagaaagagctcagtatcctaaag
tccatggagtttggctcttcaaacttctcctcagcacaggactctaagaagcctctggag
atgttgttgaagagtcgaggcctgcagtctgagagctcctccctgcgcctaaacaacagt
gagctgagtggtgtgagggagcgaaaggtcaaagactcaccagagggtcaacagcgtctt
cctgccacgcccatgggcaccaacttgcagggctcccctccccctccctcctctcaactc
ctcctgcgcactggctcaggtggttcctccgacaccacccctgtcaccaccgccaatggc
acgcaccacttctcgcccacgggcggcgggcttggcgggcaggacttcttcagcccctcc
tcgctggcgtcggcaggcaccgctttccccctggcgggcaaagtgtcgctcaattccctg
ctacagcgccagctcatgcagaccttctactccaaagccctgcaggactcagtgtctggc
caggccctgctcttctcccctgcccactacccaacccctaactccctctcagccagccct
ctgccaccccatcagtcattgcagtcgcaatcccagcatccgtcagcgggcagcccagac
gttaatggcctagccccctcgcccagccagtcagagggtgcagggagtgtctcggaaggt
gaagacatggacacatctgagatagcgcgtcaggtcaaggagcagctgatcaagcacaac
attgggcagaggatcttcggccactacgtgctggggttgtcccagggttcggtcagtgag
atactggctaggcccaagccctggagcaagctgaccatcaggggcaaggagcccttccac
aagatgaggcagttcctatctgacgagcagaacatcttggcactgcgcagcatccagggg
aggcagagagagaacccaggccagaacctgaacagagtgtttcaggaggttccgaagcga
agaaccggctccgaaggctcctcgagggcaggtaacatcaccacgcggatccgtactccg
gagagtgggtcagacgaggccatcaagtccatcctggagcaggccaagagagagctgcag
gtccagaaggctgatggtgtggacaacagacagcgacgacagacaggttacccccgaggc
atgggcaactatttcgcaaaatatgcacaaagtctcagactcgtctctctccctgcagtg
gactcgtctcagacccctccctcgtccagcattggtgggggtggtagtatcggctcaggt
ggatcctccagctcagacgagaccatccgctccatcctagagcaggcaaggagggagatg
gaggcccagcaggccgccctggagcccatcctcaagccctcctccatgggcccctctgac
ctggccctgctctctcctaaactcctgggcgcttccactctcccggcctcctactcaccc
ctggccctctccctcaagaagccctccatccccccatcctcctcgccctcctccctcctg
gacttccactctgccatggtgaaggaggcaggaacggtggtggtgggagaaggcggggga
ggaggagggtctctaatggacggagggaccaagcaggggcggggctcctggagggaccaa
tggtggaatagtatgcaccccggggggcggggagtcacgtctagcatgaacgacgacgcg
cggagtcaggaggacagcaaggagaagcctccccggctggccggctcgtcctcggcgctg
gcccccttctcctcctccgtctccatctcctccccggactgctggaaggactggccccgg
gccgagtccccatactcccaggctgactccgagcccggcggaggcaccaacacccagggg
cccagccgcgccaacaccccccagagcagcccctctcccctgcccctgtccttgagcctg
gggcccctgggttccctgttgacacccgcagccaaaccagtcaagccggtggtggcgccg
ctcacgcctgagcagtacgaggtctacatgtaccaggaggtggacacggccgagctcacg
cagcaggtcaaggacaagctggccaagaacggcatctgccagcgcatctttggagagaag
gtgctgggcctatctcagggtagtgttagtgacatgctgtccaggcccaagccctggagt
aagctgacccagaagggccgggagccctttatccgtatgcagctgtggctcaatggagag
ctgggccagaacgtcctgcccttacagggccagccacaagagaacaccccaaagacctca
gccagctgcagcccagcaccggagtcacccctcagctcggccgaggagtcagtgaagagc
ttgggggagcaggtgggaggagagggatgtgggggtggaggagggttgtcccagttcccc
cccagggaacccagcgagccctctgagtcccagcccggcacaccgctgcccgtccccggt
cactcaggtctcagcatccaggagatggtggccatgtccccggagctggacacctacgtc
atcaccaagaaggttaaggaggtgctgacggataacaacctcggtcagcgtctatttggg
gagaccatcttgggtctgacccagggctcggtgtctgacctgctggcgaggcccaagccc
tggcacaagctcagtctgaagggacgtgagcccttcgtccgcatgcagctctggcttcag
gatccacgcaacgtggagaaactcatggacatgaaacgcatggagaagaaagcctacatg
aagcggcgccacagctcggtgagcgagagccagacggcggacagtgggggcttgtcgggg
ggagacttcagccaggggggcagcccccagcacggcctcggccaccacctgcaccagcaa
cagcccccccagcagcacctgaagaaggctcgtgtggtgctggcccccgaggagaaggag
gccctgaagagggcctatcagcagaagccctacccctcgcccaagaccattgaggagctg
gcgtcacagctcaacctcaagactagcaccgtcatcaactggttccacaactataggtct
cgtatccgacgggagctgttcattgaggaaatccagcgaggtgagggcggtgagggtgtc
tccccatccaccagagcgggcaaggccagcgagggcgacagctgtgacggcaccgagtcg
gacggcacggtggagggcacacgccccggccacgagcaccacccagcctcagagggcgag
tgggggtccgaccacagggacgagggaactaccttggccactggcagcaccgccgcaggt
accagcggcagcctgttcagcttccccgagatcagccatgtttcctctgtgtccttggct
gctaccgccgctgcccgcaacccccgcgacaacagcctgcgcaagaagaaagccgccaac
cttaataatatcatccaccgtctggagaaggccgcaagtaaagacgagccccatgagtgg
gagttctaa

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