Syntrophus aciditrophicus: SYN_02909
Help
Entry
SYN_02909 CDS
T00346
Name
(GenBank) DNA helicase
Organism
sat
Syntrophus aciditrophicus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTES_1575
AAA_11
AAA_12
AAA_30
AAA_19
DUF559
UvrD-helicase
Helicase_RecD
nSTAND3
Viral_helicase1
AAA_22
AAA_16
PIF1
ResIII
PhoH
AAA_31
T2SSE
AAA
DEAD
Motif
Other DBs
NCBI-ProteinID:
ABC76696
UniProt:
Q2LRI4
LinkDB
All DBs
Position
834562..839382
Genome browser
AA seq
1606 aa
AA seq
DB search
MGGLVVNDVIKNKIRQLYQFLKEANQLRFRPVRVLSDQPKVVRLADMPNHPAMQLFRPVR
TENIQEVPDLLLRVKRPPLTKCPPPPPSIASWLVPNWDDPARTVSVAESQNTTDNESKTL
TIRFDEDPQRVADLKAWSEQRKAWIEPELSARKAMSFFEVFYDIYSAIEKDGEGLELLVA
DGHFLWKATSGIDGPVTVHHPVLLKRVELRFDPNVPEFTIHETDREPELYGSLFVDLEDV
APAAIRNRKRELETSGYHPLGWDDTGAFLRAFIQTVSPLKGEFLDDLPHDGATATPRLYR
DMVLILRKRVAGIANAVDAIIDDIEQQDVFPPSLAQITGTMAEWESAGLGESSGACSAGS
FSGGTSEKSLSDDDILLAKEANDEQMQIIRRLEHCGAVIVQGPPGTGKTHTIGNLIGHLL
AQGKSILVTAQSAKALRVVREKVPEMLQPLAVSVLGSDQDARRQLESSISSITERLTGNT
VDSLLQKAKNFEAERRNLLFQMKQLSHRLREALENEYREIFVGDRHFTPSDAARFVSINR
EAHDWIPSPIKLGTELNLTEQELVRLYALGTSYTAEEEQDARYPLPEMAMLPSERQFQIM
VSEYQHLTTIDLSSDANHWQPSDCGSELLEKLATELAAEFSDDLRHQAWRPYAIVAGIHG
GTEREVWERLIADIEEAAEANLKHALVLHHSPRLSEALPVHRQHQISIEICGHIDTGGKL
GFLQLATHSEWRHFIKTASVTAGQPSHRDHFEALGHLAELEYLRARLELAWNSMIGQHIQ
QPFNSLGSAPELACRALVPEIQRCLDWHASVWEPLTAKLKAVGLKLDDLITSLTREATQI
SEYLVIERLASSILPKLLSTEAGRRKLCECEANFSQLANLATQVDPTSPDRGCIGRIIAA
VRSRNPDSYSSALEYTRRLHAVKPLVAERDALAGKLGLIAPGWAEQITHRVPPHHDGKVP
GNFAMAWTWRQLHYTLAERDKLDTHELQRQIDRTRETLRQVTQWLIDAKAWGKQLERLQG
NPSIRQALVGWLDATKRLIYTRQLDKRQTLLSESRKLMKKCADAVPVWIMPISILAESFD
PRATRFDVVIIDEASQADLNALIPLYLGKQVIVVGDHEQVTPLGVGKKQTILENLRKSML
QDIPNSFLFDNLFSIYDIGRESFGDAIRLVEHFRSVPEIIAFSNLLSYEGKIRPLRESNS
TDIKPACVGCRVDGVREGDINKAEARRIIDTIKAMIRHPRYTGKTIGIISMLGGAQALLI
QSMLHKEISGFEIAKRRIQAGISGEFQGDERDIMFLSMVDSSSDEGQLRTTGEGAFELIK
KRYNVAASRARDQMWVMHSFDPDLHLKSSDIRLKLLQHVRDPLASLRIFNQEVGKTESPF
ERDVLKRLTNAGYRVKSQWQVGYYRIDMVVEGAGKRLAIECDGDRYHPMEKLSDDMERQA
ILERLGWQFIRIRGSAFYRNPDLAMRPVFDRLEELEIFPEADVGETTASDMTLIHELDEL
IRAGFGPESDEPENEVMEDVSTDERENDLFAGSSPIRPTDVYPSQTEALLEKLGGTALLE
TFLRDLANSKGFKRLGVNVRKKLEAELAMLVREGKIAIDGGIIRLL
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgggaggactcgtcgtgaatgatgtcattaagaacaagattcgccagttgtaccagttc
ctgaaggaagccaatcagcttcgcttccgtcctgtccgtgttctttcggatcagccgaag
gtcgtccggctggcagacatgcccaatcatccagccatgcaactgtttcgaccggtgcgt
acggagaacatccaggaggtcccggatttgctgctgcgcgtgaagcgtcctccgttgacc
aagtgcccgccgccgccgccgtcgattgcctcgtggctggtaccgaactgggacgatccg
gccaggacggtttccgtcgcagaaagccagaacaccaccgacaatgaaagcaagaccctc
accatccggttcgatgaagacccgcagcgcgtggctgacttgaaggcttggtcggaacag
cgcaaggcttggatcgagcccgaactatccgcccgcaaggcgatgtccttcttcgaggtg
ttctacgacatctactctgccatcgagaaggatggcgaaggactggaattgcttgtcgca
gatgggcatttcctgtggaaggccacttcgggtattgacggtccggttacagtgcatcat
ccggttctgctcaaacgcgtggagcttcgatttgatcccaacgtccccgaatttacgatc
cacgaaaccgaccgggagccagagctttacggcagcctgttcgtcgatctggaagacgtc
gctcctgctgcaatccgtaatcggaaaagagaacttgaaacctcgggctatcaccccctg
ggatgggacgacaccggagccttcctgcgcgccttcatccagacggtttcgccgctcaaa
ggggagtttctcgacgatctgccccacgatggtgctactgctacgccacggctgtatcgg
gacatggtcctgatcctcagaaagcgtgtcgctggcatcgccaacgccgtcgacgccatc
atcgacgatattgaacagcaggacgtcttcccgccgtcgctggcacagattaccggtacg
atggccgaatgggagagtgctggtctaggcgaaagctccggtgcctgttccgccggcagt
ttcagtggcggtacgtcagagaaaagccttagtgacgacgatatccttctcgcgaaggaa
gccaatgacgagcaaatgcaaatcatccgtcggctcgaacattgcggagcggtgatcgtc
caagggccgcccggtaccggcaaaacccacaccatcggcaatctgatcggtcacctgttg
gcgcagggaaaatccatcctggtcaccgcgcagtccgccaaggcgctgcgagtggtacgc
gaaaaggtgccagaaatgttgcaacccttagccgtctcggtcctcggcagtgaccaggac
gcccggcggcaattggaatcctccatcagctccatcaccgaacgcctgaccggcaatacc
gttgacagccttctccagaaggcaaagaacttcgaggccgagcgcaggaatttgttgttc
cagatgaagcaactgagccacaggctgcgtgaagcacttgagaacgagtatcgcgagatc
tttgtaggcgaccggcatttcacaccttccgatgctgcccggttcgtctcgataaaccgt
gaagcacacgactggataccgtcgccgattaaacttgggaccgaactgaatctgaccgaa
caggaactggtgcggttatatgccctcggcacctcctatactgcggaagaagaacaagat
gctcgctaccccttgccggagatggcgatgctgccctcggagcgacaattccagatcatg
gtgtcagagtatcagcacctcacgacgatcgacctgtcgtctgacgccaatcactggcaa
ccgtccgattgcggcagcgaattgctggagaaactggccactgaactggcagcggaattc
tccgatgacctgcgtcatcaagcatggcgtccttatgccatcgtcgccggcattcacggc
ggtactgaacgagaggtatgggaacgacttattgccgatatcgaggaagcggcggaagcc
aacttgaagcacgcgctggtgcttcaccacagcccgcgactatcagaggctctgccggtg
cataggcagcaccaaatttccatcgaaatctgcgggcacatcgataccggtgggaaactt
ggtttcctgcaactggcgacccactccgagtggcgtcatttcataaagacagcgtcagtc
acggctggacaaccgagtcaccgcgaccatttcgaggctctcggacaccttgccgaactc
gagtacctgcgagccagactggaactagcgtggaattcgatgatcgggcaacacatccag
cagccgttcaacagccttggatcggccccggagcttgcctgtcgtgcactcgttcctgaa
atccagcggtgcctggactggcacgcttcggtatgggaaccgctaacagccaagctgaag
gctgtgggacttaaactggatgatctgatcacatcgcttacccgggaagcaacgcagatt
tcggaatatttggttatagaacggctggcgtcttcaatactacccaagctgctgagcact
gaagcagggcgtcgtaaactgtgcgaatgcgaggctaacttcagtcagcttgctaacctt
gccacgcaagttgatccgacatcgcctgatcgcggctgcattggccgcattatcgccgcc
gtcaggtcgcgtaatcctgattcttactcttcggcactggagtacacgcggcgattgcac
gcagtgaagccgctggttgccgaaagagatgcattggctggaaaactgggccttatcgca
ccgggttgggcggagcaaattacccaccgagtgccaccgcatcatgatggaaaagtcccg
gggaattttgctatggcgtggacatggcgacagttgcactacacccttgccgagcgcgat
aaactcgatacccatgaactacaacgacagattgaccggacgcgagaaacgttgcggcag
gtgacgcaatggctgatcgatgccaaggcctggggtaaacagctggaacgactgcaagga
aatccttcaattcggcaggcattggttggttggctagatgcgaccaagcgccttatttat
acgcggcagttggacaagcgacagacactcctttccgaatcgcgaaaactgatgaagaaa
tgtgcggatgcggtaccggtctggattatgccgatctcaatcttggccgagagctttgat
ccacgcgcgacgcgcttcgatgtggtgatcatcgacgaggccagccaagccgaccttaat
gcattgattccactttatctaggcaagcaggtcatagtcgtcggagaccatgagcaggtc
acgcccctgggtgtaggcaaaaaacagacaatcttggaaaacctgcgcaagtcaatgctg
caggatattccgaattcattcctcttcgacaatctcttctcaatctatgacatcgggagg
gaatcattcggggatgcgatccgactagtcgagcatttccggagtgtgcctgagatcatt
gccttcagcaatctgctttcttacgaggggaagattcgaccgctgcgcgaatcgaactcg
acggacattaaaccggcatgtgtcggatgtcgggtagacggggtacgcgaaggtgacatc
aacaaggctgaggcgcggcgcatcatagataccatcaaggcgatgattcgtcacccgcgt
tatactggcaagaccatcggcatcatctccatgctgggcggtgcgcaggcattactgatc
cagtccatgcttcataaggaaatatccggtttcgaaatcgctaagcgccgcatccaggcg
ggcatctccggggagttccagggagacgagcgtgacatcatgttcttatcgatggtcgat
agctcgtcagacgagggccaacttcgtaccactggcgaaggtgccttcgaattgatcaag
aagcgttacaacgtcgcggccagccgtgcccgggaccagatgtgggtcatgcattcgttt
gatcctgatcttcacctcaaaagcagcgacattcgactcaagttgcttcaacacgtccgc
gatccactggcatccctccggatcttcaaccaggaggtcggcaagactgaatcacccttc
gaacgcgatgttcttaagcgccttacaaacgctgggtaccgcgtcaagtcgcaatggcag
gtaggttattaccggatcgacatggtggtcgagggtgcgggcaagcgtctagctatcgag
tgcgatggcgaccgctatcatccgatggaaaagctgtctgatgatatggagcgtcaagcc
atccttgaacgcttgggctggcagttcataaggattcgcggtagtgcgttctatcgtaac
ccggatcttgctatgcggccggtttttgatcgactcgaagagttggaaattttcccggag
gcggatgtcggcgagacaacggcctctgacatgaccctgatccacgaattggacgagctg
attagggctggatttgggccggaatcggatgaaccggaaaacgaggtgatggaagatgtt
agcacggatgaaagggaaaacgacctctttgccggttcctcgccgataaggccaaccgac
gtatatcctagccagaccgaggcacttctcgaaaagcttggtggaacggcattgcttgag
accttcctgcgtgatttagccaattcgaaaggtttcaaacggctgggtgtcaatgttcgc
aagaaactggaggcggaactggcgatgcttgtccgagaggggaagattgcaattgatggc
ggaatcataaggctgctgtga
DBGET
integrated database retrieval system
