Sulfobacillus acidophilus TPY: TPY_0903
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Entry
TPY_0903 CDS
T01576
Symbol
alkA
Name
(GenBank) putative DNA-3-methyladenine glycosylase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
say
Sulfobacillus acidophilus TPY
Pathway
say03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
say00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TPY_0903 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
say03400
]
TPY_0903 (alkA)
Enzymes [BR:
say01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
TPY_0903 (alkA)
DNA repair and recombination proteins [BR:
say03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TPY_0903 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AEJ39093
LinkDB
All DBs
Position
851877..852779
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AA seq
300 aa
AA seq
DB search
MEDFMREAIEVRAPYDFRRMLTRIQSRPTSLTWVDMTAGQWARVLYVEGEPVPVRVSFSG
TVEKPRLLVESPIVGNRQALILAEVRRLLSVEVPLEPFLAQAALRPEWITVLSRWAGYRV
ILDGDPFESLVRTVIGQQIHVAVAAKLVDRLVVRAGRRITFEDISLGVFPRADTLRHWSS
EEWTALGFSAPKARYLTTLAAVAADEGWNGKTFQEMSDDAVMKRLLPLPGIGRWTAECFL
IFGLGRLDVVPAGDLGLQRALQRLYGWSQKPSESEVREVLAPFQPWRSLATLYLWQSLLP
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtggaggatttcatgcgggaagctatcgaggtgcgcgccccttacgactttcgccggatg
ctgacgcgcatccaatcccggccgacttccctcacttgggtcgatatgacggcgggacag
tgggcccgggtgctttatgttgaaggcgaaccggttccggtgcgcgtcagcttttccggt
accgtggaaaagccgcgactcttggtcgagtctccgattgtcggcaatcggcaggcgctc
atattggccgaggtccgtcggcttttgtcggtcgaggtcccgttagagccttttctggcc
caagcggctttaaggccggagtggattaccgtgttgagtcggtgggccggataccgcgtg
attcttgacggggatcccttcgaatccctcgtgcggaccgtcatcggtcagcagattcac
gtggcggtcgccgccaaactggtcgatcggttggtcgtccgggccggtcgacgtatcacg
tttgaggacatttctttgggggtgtttccgcgggcggacaccctccggcactggtcttcc
gaggaatggacggctctcgggtttagtgccccaaaagcccgctatctcacgacattggcc
gcggtagcggcggacgaagggtggaacgggaagacgtttcaggagatgtcggatgacgcg
gtgatgaaacggctattgccgttgccggggattggacgttggaccgcggaatgctttttg
atttttggtttaggacgcttggatgtggtgcccgccggagatttaggactccagcgggcc
cttcagcgtctttacgggtggtcacagaagccgtcggagtcggaggtgcgggaggttttg
gctccgtttcaaccgtggcgtagtttggccacgctctatttatggcaaagtcttttgccg
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