Shewanella amazonensis: Sama_0860
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Entry
Sama_0860 CDS
T00445
Name
(GenBank) transcriptional regulator, LysR family
KO
K04761
LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
saz03000
]
Sama_0860
Transcription factors [BR:
saz03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Sama_0860
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ABL99067
UniProt:
A1S3W1
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Position
1050167..1051138
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AA seq
323 aa
AA seq
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MLKCKVSYQSIQAAVIGKMKHLPSLKNLYYLVNLYQEQNFNRAAKVCNVSQSTLSSGIQN
LEEQLGHQLIERDHKSFMFTAIGEEVVGRCRKILTDVDDLVELVRNQGEPMTGEIRLGCI
PTIAPFLLSRVVRHCQQHYPNMVLLLKEDTTERLLDALGKGELDLLLLALPVDTSGFHSM
KVGVDPFKMVMHKDLSHEVHQPVDYQALPDESIFLLQNEHCITGHAISACQLGDSNKINP
FAATSLHTLVQMVNSKLGTTFLPQMAIDAGILKDTELAVMDPPGSAPYRDIGLVWRQTTS
RIRTFRTLGLEIEKLLGGESRQG
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
gtgttaaagtgcaaagtgtcctatcaatccatccaagcggcggtaatcggtaaaatgaaa
catcttcccagccttaaaaatctctattatctggtgaatctctatcaggaacagaatttt
aatcgcgccgccaaggtatgtaatgtcagtcagtcgaccctctccagtggtattcaaaat
cttgaggagcaactgggacatcaattgattgaacgcgatcataagtcatttatgtttacg
gccatcggtgaagaagtggttggccgctgccgcaaaattctgaccgatgtggatgatttg
gtggagttggtgcgcaatcagggcgaacccatgaccggggaaatccgtttgggctgtatc
cccaccatagccccttttctactgagccgggtggtgcgtcactgtcagcagcactatccc
aacatggtattactgctgaaagaagacaccaccgagcgcctgctcgatgcccttggtaaa
ggtgaactggatttactgttgttggccttgcctgtggatacttcaggatttcacagcatg
aaagttggtgtggacccgttcaagatggtgatgcacaaagacttgtcccatgaagtgcat
cagccggtggactatcaggcgttaccggacgaaagtatttttctgctgcagaatgaacac
tgtattacgggtcatgccatcagtgcctgtcagttgggcgactccaacaagattaatccc
tttgctgcaaccagtctgcacaccctggtgcaaatggtaaacagtaagctgggcaccacc
ttcctgccacaaatggccattgatgcgggtatcctcaaagacactgaactcgcggtgatg
gacccaccgggcagtgcaccctatcgcgatatagggttggtgtggcgtcaaacgaccagc
cgcatccgaacgttcagaacactggggttggaaatcgaaaagttgctcggtggcgaatcc
aggcagggctga
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