Shewanella baltica BA175: Sbal175_0647
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Entry
Sbal175_0647 CDS
T02014
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
sbb
Shewanella baltica BA175
Pathway
sbb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sbal175_0647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbb03400
]
Sbal175_0647
DNA repair and recombination proteins [BR:
sbb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sbal175_0647
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sbal175_0647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_21
AAA_25
AAA_23
NACHT
nSTAND3
APS_kinase
Viral_helicase1
BCA_ABC_TP_C
Zn_Tnp_IS1595
Motif
Other DBs
NCBI-ProteinID:
AEG09940
UniProt:
G0AWK2
LinkDB
All DBs
Position
complement(747679..750561)
Genome browser
AA seq
960 aa
AA seq
DB search
MDKIEIRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLMFARVGEPRC
PTHNQPLAAQTVSQMVDKVLEMPQDSRLMLLAPVVNARKGEHVKLLEGLSAQGYIRARID
GEVCDLTDPPTLDLHVKHTIEVVVDRFKVRDDIKQRLAESFETALELSGGIATVATMDDD
TGTGKAKGEELIFSANFACPHCGYSMAELEPRIFSFNNPAGACQTCDGLGVQQFFDPERV
ISNTELSLAGGAIRGWDRRNFYYFQMLSSLAEHYKFDVEVPYEQLSEKVRKIVLYGSGKD
SIAFKYINDRGDVVVRNHPFEGILNNMDRRYRETESNSVRDELAKFINTQACQSCSGSRL
REEARNVFLGDINLPQLTTWSIGEALDYFEKVEFSGQKAQIAEKILKEIRDRLGFLVNVG
LNYLSLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLQTLIHL
RDLGNTVIVVEHDEDAIRMADHVIDIGPGAGVHGGEVICDGPIEKIIACEESVTGQYISG
KRSIHIDTPRIPFDKTQVIELFGARGNNLRNVDLTIPIGLFTCVTGVSGSGKSTLINDTF
FKIAHRMLNGATVDEPSPYDRIEGMELCDKVVDIDQSPIGRTPRSNPATYTGIFTPIREI
FAGTQESRTRGYQVGRFSFNVKGGRCEACQGDGLIKVEMHFLPDVYVPCDSCKGKRYNRE
TLEVRYKGKNIHEVLQMTVEDARTFFDAVPAIARKLQTLMDVGLSYVRLGQSATTLSGGE
AQRVKLAKELSKRDTGQTLYILDEPTTGLHFADIQLLLDVLHRLKSHGNTIVVIEHNLDV
IKTADWIIDLGPEGGGGGGMILATGTPEEVAEHPTSHTARFLKPLLKRDIEMAKANKAKA
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggataagattgaaatacgcggcgcacgcacccacaatctcaagaatatcaacctgact
atcccaagggataaactgattgtcatcacgggcttatcgggatctggcaaatcctccctt
gctttcgatactttatatgccgagggccagcgacgttacgtcgagtccctgtcagcctat
gctcgccaatttttgagtttgatggaaaagcccgatgtggaccatatcgaaggcttaagc
ccagcgatatccatagagcaaaaatccacctcccataacccacgctcaaccgtgggtact
attaccgaaatttacgattacctgcgcttgatgtttgcccgcgtgggtgagccgcgttgt
ccgacacacaatcaacctttggcggcgcaaaccgtcagccagatggtcgataaagtgtta
gaaatgccccaagacagccgcttaatgctgctcgcgcctgtggtcaacgcccgtaagggt
gaacacgttaaattgctcgaaggtctatcggcgcagggttatatccgtgcgcgtatcgac
ggtgaagtgtgtgacttaaccgatccaccaaccttagatttacacgttaagcacacgatt
gaagtggtcgtcgaccgttttaaagtgcgtgacgatatcaagcaacgcttagctgaatcc
tttgaaaccgcactggaactctccggcggcatcgcgaccgttgccaccatggatgacgat
acaggtactggtaaagcaaaaggcgaagaactgatcttttcggccaacttcgcctgcccg
cactgcggatattcgatggcggaattagagccaaggatcttctcctttaacaatccagcc
ggcgcgtgccaaacctgtgatggtttaggggtacaacagtttttcgatcctgagcgcgtg
atcagcaacactgagctttcactggctggcggcgcgattcgcggctgggatagacgcaac
ttctactatttccaaatgctcagctcactcgccgaacactataagttcgatgtagaagtg
ccctacgagcagctcagcgaaaaagtccgcaaaatcgtcctgtacggatcaggcaaagat
agcattgcttttaagtacatcaacgatcgcggcgatgtggtggtgcgtaatcaccccttc
gaaggcattctcaacaacatggacaggcgctatcgcgaaaccgaaagcaactcggtacgt
gacgaattagccaagtttatcaatacccaagcctgccaaagctgtagtggttcgcgtctg
cgcgaagaagcccgtaacgtgtttttaggcgatatcaatctgccgcaactcaccacttgg
tcgattggcgaagccttagattacttcgagaaagtcgagtttagtggccaaaaggcgcag
atcgccgagaagattttaaaggaaatccgcgatcgcttaggtttcctcgtgaacgtgggc
ctcaattacttgagcctatctcgctcggcggaaaccctctcgggcggtgaagcccaacgt
attcgactcgccagccaaattggcgccggactcgtcggcgtgatgtatgtgctcgacgaa
ccttcaattggcctgcatcaaagggataacgaacgtctgctgcaaaccctgatccacctc
cgggatttgggcaacacagtaattgtggttgagcacgatgaagatgcgatccgcatggcg
gatcacgtgatcgacataggccctggcgcaggtgttcatggcggcgaagtgatttgcgac
ggcccgattgagaaaatcatcgcctgtgaagaatcagtcaccggacaatatatttctggt
aagcgcagcattcatatcgatacaccgcgcattccgttcgataaaactcaagtgattgag
ttatttggcgcacgcggcaacaacctgcgcaatgtggatttaaccatacctattggttta
ttcacttgtgtaacaggtgtatccggttcgggtaaatcgaccttaatcaacgataccttc
ttcaaaattgcccatagaatgctcaacggggcgactgtggatgagccatcaccctatgat
cgtatcgaagggatggagctgtgcgacaaagtagtcgatattgaccaaagcccgattggc
cgcacaccgcgctctaaccctgccacttatactggcatcttcaccccaattcgcgaaatt
tttgctggaacccaagagtcacgtactcgcggttatcaagtcggccgcttctcctttaac
gttaaaggtggccgctgcgaggcttgccaaggcgacggcttgatcaaggtcgaaatgcac
ttcctacccgatgtgtatgtaccctgcgattcctgtaaaggtaagcgctataaccgcgaa
accttagaagtacgctataaaggcaagaatattcacgaagtactgcagatgacagtggaa
gatgcgcgcactttcttcgatgccgtacctgccattgcccgtaagctgcaaactttgatg
gatgtaggtttgtcctatgtgcgcctcggccaaagtgcgaccacactttcgggcggcgaa
gctcagagggtgaaactcgccaaagagctgtctaagcgtgacacgggccaaaccttgtat
atcttggatgaaccgaccacgggcttacactttgccgatatccaattactgctcgatgta
ttgcatcgtcttaaatcccacggcaacacgattgtggtgattgagcataatctggacgtg
atcaaaacggcggactggattatcgatttaggtccagaaggcggcggtggtggcggtatg
attttagccacaggcacgccggaagaagtcgccgagcatccaacctcccacacggcacgc
ttcttaaagccactgctaaaacgggatattgaaatggcaaaggccaataaagccaaggca
taa
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