Sphingobium baderi: ATN00_04400
Help
Entry
ATN00_04400 CDS
T04194
Name
(GenBank) type VI secretion protein
Organism
sbd
Sphingobium baderi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3363
MobL
Relaxase
Motif
Other DBs
NCBI-ProteinID:
ALR22374
UniProt:
A0A0S3F3R8
LinkDB
All DBs
Position
869858..871588
Genome browser
AA seq
576 aa
AA seq
DB search
MSRDDNFRIRPGRIRSQGSQRSRPIIVQALAAAQRAGGHVSRRGRIVAPGSSTFGRGRVA
SVRATHRLGHRSRQVIVKARVVRQGGRASLAAHLNYLQRDGVTRDGEKGVLFGAEADSLD
RNEFAARCENDRHHFRFIVSPEDADHMRDLKGFTRQLMTRMESDLGTRLDWRAVEHWNTD
NPHVHIIVRGIGEDGQNLVISRDYIGEGMRAQAREIVTRELGLRSDLDIRQSLERQVEAE
RWTEIDRDLSRTMQRDGLIDTAPAPAVQPDGDHALRMGRLRKLERLGLANEIAPGQWTLA
DDAQAALRELGERDDIIKRMHKAMTERGIDRGAASYVLDADSGRPVIGKLVDRGLHDELT
GGAYAIVDGIDGRTHHIRFSDIEATGDCKPGAIVELRRFEDRKGRQRVALAVRSDMDLSA
QIHAPGATWLDRRNLSSDGRDLGGGFGTEVGVAMEARAEHLADEGLARRQGQRVIFARNL
LDTLRRRELDAAAKDLSAEIGLPHAPSKAGEYVAGTLRQRVTLASGRFAMIHNGLSFQLV
PWSPSLDRQIDKHISGVMRGDGGVDWSFGRGRALGL
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgacgacaatttccgcatccggccaggccgcattcgctcgcagggaagccag
cgctctcgaccgatcatcgtccaggcgctcgccgccgcccagcgtgccggcggtcatgtt
tcacgacgtggccggatcgtcgcgccgggcagttcaaccttcgggcgtggccgggttgcg
agcgtgcgcgcgacccaccggctcggccaccgatcgcgtcaggttatcgtcaaggcgcgc
gtggtccggcagggcggccgggcctcgctcgctgcccatctcaattatctgcaacgcgat
ggcgtcacccgcgacggcgagaagggcgtgctgttcggcgccgaggcggacagcctcgac
cgcaatgaattcgccgctcgctgcgaaaacgaccggcaccatttccgcttcatcgtctcg
cccgaggacgcggaccacatgcgcgacctcaagggcttcacccgccagcttatgacgcgg
atggaatcggacctcggcacccgtctcgactggcgagccgtcgagcattggaataccgac
aacccccacgtccacatcatcgtgcgcggcatcggtgaggacgggcaaaacctcgtcatc
tcgcgcgattatatcggcgaagggatgcgggcgcaggcgcgcgagatcgtgacccgcgaa
ctgggccttcgtagcgacctcgacatccggcaatcgctggagcggcaggtcgaggccgaa
cgctggaccgagatcgaccgcgacttgtcgcgcaccatgcagcgtgatgggctgatcgac
acggcgcctgcgcccgccgtgcagccggatggcgaccatgcgctgcgaatgggacgactg
cgcaagctggagcggctcggtctcgccaacgagatcgcgccaggccagtggacgctcgcg
gacgacgcgcaggcagccttgcgcgagctgggcgagcgcgacgacatcatcaagcgaatg
cacaaggcgatgaccgagcgcggcatcgatcgaggcgccgccagctatgtgctcgacgcc
gattcgggccggccggtgatcgggaagttggtcgaccgcggcttgcatgacgagctgacc
ggcggcgcctatgcgatcgtggacgggatcgacgggcgcacgcatcacatccgcttttct
gacatcgaggcgaccggcgattgcaagcccggcgccatcgtcgaactgcgccgtttcgag
gaccgcaagggccggcagcgggtggcgctcgccgtccggtcggacatggacttgtcagcg
cagatccatgcaccgggcgccacctggctcgaccgccgcaacctttcgagcgatggccgc
gatcttggcggcggtttcggaaccgaggtgggtgtcgcgatggaagcgcgcgccgagcat
ctcgccgacgaaggcttggcgcggcggcaaggccagcgcgtcatcttcgcgcgcaatctg
ctcgacacgctcaggcggcgcgagctggacgcagccgccaaggacttgtcggccgagatc
ggcttgccgcacgcgccgtccaaggccggcgaatatgttgcgggcacgctgcgccagcgt
gtcacccttgcctctggccgcttcgccatgatccacaacggcttgagcttccagctcgtg
ccctggtcgccttcgctcgaccgccagatcgataagcacatctccggcgtcatgcgcggc
gatggcggcgttgactggtcgttcgggcgtgggcgggcgttgggactttag
DBGET
integrated database retrieval system
