Sphingobium baderi: ATN00_07755
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Entry
ATN00_07755 CDS
T04194
Name
(GenBank) conjugal transfer protein TraD
Organism
sbd
Sphingobium baderi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwB_AAD_bind
TraG-D_C
T4SS-DNA_transf
AAA_16
AAA_19
FtsK_SpoIIIE
AAA_11
AAA_22
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ALR20215
UniProt:
A0A0S3EXX0
LinkDB
All DBs
Position
1554171..1556270
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AA seq
699 aa
AA seq
DB search
MSIFRNDTLGSWTRGGQAIVHNVRMTTQVFYQTLLASFIIWIIGTFWYAFEKSTEYERFV
LLKLAEAMIKVDAAAGTNDPVQFRTPEGQAYRTSADWLVASSLARKTLHAFEVYLLHGAL
ISGVFSLVMLAWAWFYFTRTGRGLGSNEYLRGARFGTIRQVKRALWRQTKGPLLIGKVPV
PQAYEPEHILLCGAPGTGKTNLIVGMLEGIRKSRRRAIVYDTAGTFVEKFYRQGTDMLLN
PLDQRTARWSPWVDVPRDYHYDQIAESTIPDKHGDPFWAKAARGTLVAVMRKLARQKHTY
VSVLLDRLLRSKLKDLAAFVSGTDAAAFISTEGERTSAGIQAELASVMRSFGYLDDTDDG
FSIRDWVEKGEEGSWLFITVKADQLPSLRPLITVWLDIAISAIMSLTPDRDRRLYCVIDE
LPTLQKLPSLSDFLARARKYGGCGILGFQSYPQLEATYGIQDAAAITGYCSTWVALRAND
TATAKHVSENLGQVEQVEANEGMSYGVNDMRDGVNLSRMQVTRPLVIPTEVTNLPNLVGF
LRFGRNLPVVRFDSAFNAIASLGPAFLERTDPPVLVDKAKDLVRIAHAEARVREAIERES
AQNLPPPTPPQAAADVPEKSAPSSKAPRTSPRQPDLFNPPQAKVDPKLVEDILHAREGDD
LPVPPREAWTILAGKQGEIRSDLVQHGRDDGPREPAKPA
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
gtgagtattttccgcaacgacacgctgggttcatggacccgcggcggacaggctatcgtc
cataacgtccgaatgacgacgcaggtcttctaccagaccctgttggccagcttcataatc
tggatcatcggcacattctggtacgccttcgagaaatcgacagagtatgaacgcttcgtc
ctgctcaaactcgccgaggcgatgatcaaggtcgacgcggcagccggtaccaacgatccc
gttcagttccgcacgcccgaaggccaggcctaccggacttcggcggactggctcgttgcg
tccagcctagccaggaagaccttgcatgcgtttgaggtctatctgctccatggagcgctg
atctcgggtgtgttcagcctcgtcatgctggcttgggcctggttctatttcacccgaacg
ggcagggggcttggctccaacgaatatctgcgcggtgcccgcttcggcacgatccggcag
gtcaagcgcgcactctggcgccagaccaagggaccgctcctgataggcaaagtgcctgtg
ccgcaagcctatgagcccgaacatatccttttgtgcggcgcgcctggcacgggaaagacc
aacctcatcgtcggcatgctcgagggcatccgcaaatcgcgccggcgcgccatcgtctat
gacaccgccggcaccttcgtcgagaaattctaccggcagggcaccgatatgctgctcaac
ccgctcgatcagcgtacggcgcgctggtcaccctgggtcgatgtgccgcgcgactatcac
tatgatcagatcgccgaatccaccattcccgacaagcatggcgatcccttctgggcgaag
gcggctagaggcacgctggtagcggtgatgcgcaagctcgcccgccagaagcacacctat
gtctcagtcctgctcgacaggctgctccgctcgaagctcaaggaccttgcagcctttgtc
agtggtaccgatgccgccgccttcatcagcactgagggcgagcgcacatccgcgggaatc
caggccgaactcgcctcggtgatgcgcagtttcggctatcttgacgataccgacgacggc
ttctccatccgcgattgggtcgagaagggcgaggagggaagctggctcttcattacggtg
aaagccgatcagcttccctcgctgcgcccgctcatcaccgtctggctggatatcgcgatc
agcgcgattatgagcctgacccccgatcgtgaccgccgcctctattgcgtgatcgatgaa
ttgccgacgctgcagaagctgccatcgctctcggacttcctcgcccgtgcccgtaaatat
ggcgggtgcggcatattgggctttcagtcctacccgcaactcgaagcgacctatggcatc
caggatgccgccgccatcaccggctactgctcgacttgggtcgcgctgcgagccaacgac
acagcgacagcaaaacatgtctcggaaaatctcggccaggttgaacaggtcgaggcgaac
gagggcatgtcctatggcgtcaacgacatgcgggacggcgtcaacctgtcacgcatgcag
gtgacccggccgctggtcattccgaccgaggtcaccaaccttcccaatcttgtcggcttc
cttcgctttggccgcaatcttccggtggtgcgtttcgacagcgccttcaacgctatcgcg
tcgctgggaccggcctttctcgaacgcaccgatccaccggtgctggtcgacaaggccaaa
gatctggttcgtatcgcccatgccgaagcccgggtgagggaagccatcgagcgagaaagc
gcacagaatctgccccctccgacacctccgcaagcggctgcagacgtgccggagaagtcg
gcgccgtcgtcgaaagctccccgtacgtcaccacggcaacccgacctgttcaatccgccg
caggcgaaggtcgatccgaagctcgtggaagacatcctgcacgccagggaaggcgacgac
ctgcccgtcccgccacgcgaggcctggaccatcctcgccggtaaacagggggagattcgc
tccgatcttgtccagcatggccgcgatgatgggccacgtgaacccgcgaagccggcatga
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