Sphingobium baderi: ATN00_12135
Help
Entry
ATN00_12135 CDS
T04194
Name
(GenBank) type VI secretion protein
Organism
sbd
Sphingobium baderi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3363
MobL
DUF2742
Motif
Other DBs
NCBI-ProteinID:
ALR20935
UniProt:
A0A0S3EZX1
LinkDB
All DBs
Position
complement(2474678..2476432)
Genome browser
AA seq
584 aa
AA seq
DB search
MSSHDDDFQVRPGRSRDGGTKGRQAKSLVGQVMRAANKGGRGGRAYGHRRSGGGVSRFGR
GMVTAPRRARQASDRRVVVKMRIVRHQGAKFRAAPLARHTSYLEREGVTRDGAPGRLFDA
IGDQADGNDFADRCNDDRHHFRFIVSPEDAGEMEDLRAFTRELMADAQRDLSTTLDWVAV
DHWNTDNPHIHVLVRGRADDGGDLVIRRDYVREGFRQRAEDRVTLELGPRSQREIQAVLA
RDVQADRWTGLDRTLRDIADRHGGIVDLRPGPDGRGPENRHLLVGRAQKLEAMGLADSLG
PAAWTIKPGLEDKLRDLGTRGDIIKTMHKAMTKDTPHPDVSRFAIHRTAPADPVVGRLVD
RGLYDELKGSAYAVVDGIDGRTHHLRFNDIEMTGDAKPGAIVELRAWEDARGQQRHSLAT
RSDLSLGEQITSDGATWLDRNLVAREPPILGGGFGAEVAAAMEARCDHLERDGLAQRRGQ
RIIFVRALIGTLKSREMQQAQANIAAQTGLAPQQATSGDQVAGVYRQRVTLASGRFAMID
NGLGFQLVPWRPALEQHIGRHVSGTMTPGGGVDWSFGKQRGLGL
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtcacgacgacgactttcaggtcaggccgggacgctcccgcgatggcgggaca
aagggccggcaggcgaagtcgctcgtcggccaggtcatgcgcgctgccaacaagggcggt
cgcggcggtcgcgcttatggtcatcgccgaagtgggggtggcgtatcccggttcgggcgc
ggcatggtgaccgccccgcgtcgcgcgcgccaggcatcggatcggcgcgtcgtcgtcaag
atgcggatcgttcggcatcagggcgccaaatttcgggcagcgccgcttgcgaggcacacc
agctatctcgaacgggagggcgtcacccgcgacggcgcgccgggccggctgttcgatgcg
attggcgatcaggccgacgggaatgacttcgcggatcgctgcaacgacgatcggcaccat
tttcgcttcatcgtttcgccggaagacgccggggagatggaggatctgcgagccttcact
cgtgagctgatggcggacgcgcagcgcgacctcagcactacgctcgactgggtcgcggtc
gatcactggaataccgacaatccgcacatccatgttctcgtccgcggccgggccgatgat
ggcggcgaccttgtcattcggcgcgactatgtgcgcgagggttttcgccagcgcgccgaa
gatcgggtgacactggaactcgggccgcgaagccagcgcgagatacaggcggtgctcgcc
cgcgatgttcaggccgatcgctggaccggcctcgatcgaacactgagggatatcgccgac
cgtcatggcggcattgtcgatctgcgccccggtccagatggacgcggacctgagaaccgg
caccttctggtcggccgcgcgcagaagctggaggcgatgggtctggccgattcactcggg
cccgcggcctggaccatcaagccaggtctggaagacaagctgcgcgatctcggcactcgc
ggcgatatcatcaaaacgatgcacaaggcgatgacgaaagacacgccgcacccggacgtg
tcgcgttttgcaatccatcgcacggctccggccgatccggtcgtgggccgtctggtcgat
cgtggactctatgatgaactcaaaggcagcgcctatgccgtcgtcgacggcattgatggc
cgcacccatcatctgcggttcaacgacatcgaaatgacgggagatgcaaagccgggggcg
atcgtcgagcttcgcgcctgggaggatgccagggggcagcagcgccattcgctcgcgacc
cggtccgacctttcgcttggcgagcagatcacatccgatggcgcgacctggctcgatcgc
aacctcgtcgcccgcgagccgcccattctgggcggtggctttggcgcggaagtggccgcg
gcaatggaggcccgatgcgatcaccttgaacgcgatggcctcgcgcaacgcagggggcag
cgcatcatcttcgtccgcgcgctgatcgggacgctgaagtctcgtgagatgcagcaggcg
caggcgaatatcgccgcccagacaggtctcgcgccacagcaggcaacgtccggcgatcaa
gtcgcgggtgtctatcgccagcgcgtcacgttggcctcaggccggtttgccatgattgac
aatgggctgggtttccagcttgtcccctggcggccggcgctcgagcagcatatcggtcgc
catgtctccggtacaatgacgccgggtggcggcgtggattggtcgtttggaaaacagcgc
ggactcggattgtaa
DBGET
integrated database retrieval system
