Sphingobium baderi: ATN00_12415
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Entry
ATN00_12415 CDS
T04194
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sbd
Sphingobium baderi
Pathway
sbd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ATN00_12415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbd03400
]
ATN00_12415
Enzymes [BR:
sbd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ATN00_12415
DNA repair and recombination proteins [BR:
sbd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ATN00_12415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
RuBisCO_small
Motif
Other DBs
NCBI-ProteinID:
ALR22596
UniProt:
A0A0S3F4C8
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All DBs
Position
complement(2519050..2519871)
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AA seq
273 aa
AA seq
DB search
MKIATYNVNGINGRLAVLLRWLELAEPDIVCLQELKAPQERFPEIAIRDAGYRAIWHGQS
RWNGIALLSRIGEIHETRRGLPGDPEDIQSRYIEAAVNGVLIAGLYLPNGNPRPGPKYDF
KLRWFDRLHAHLATLIDLDVPVIIAGDYNVMPTDQDVYAPERWRDDALFAPEVRAAWQRL
LDQGWVDAIRHLHPRDTLYTFWKYWRGAFERNAGLRIDHFLLNPPAVAQLAAAEVDTRVR
GWEKTSDHAPVWIELTENGKRRARHAIKAERKA
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgcgacctataatgtgaacggcatcaatggacgtctggccgtgctgctgcgc
tggctggagctggccgagcccgacatcgtctgtcttcaggaattgaaggcgccgcaggag
cgtttccccgaaatcgctatccgggacgcgggctaccgggcaatctggcacggccagagc
cgctggaacggcatcgcgctgctcagccgcatcggcgagatccacgagacgcggcgcggt
ctgccgggcgatccggaggatatacagagccgctatatcgaggccgccgtcaacggcgtg
ctgatcgccgggctctatcttcccaacggcaatccacggcccggcccgaaatatgatttc
aagctgcgctggttcgatcggctacacgcgcatctggcgacgctgatcgacctcgacgtg
ccggtgatcattgccggcgattataatgtcatgccgaccgatcaggacgtctatgcgccg
gagcgctggcgcgacgatgcgctgttcgcccccgaagtccgcgccgcctggcagcgtttg
ctcgaccagggctgggtcgatgccatccggcatctccaccctcgcgacaccctctatact
ttctggaaatattggcgcggcgccttcgagcgcaatgccggcctgcggatcgatcatttc
ctgctcaatccgcctgccgtcgcgcagcttgccgctgccgaagtcgatacgcgcgtgcgg
ggctgggagaagaccagcgaccatgcgccggtctggatcgaactgaccgaaaacggcaag
cgcagagccagacacgcaatcaaagcggaaaggaaggcgtga
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