Candidatus Saccharibacteria bacterium RAAC3_TM7_1: RAAC3_TM7C01G0845
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Entry
RAAC3_TM7C01G0845 CDS
T02942
Symbol
dnaE
Name
(GenBank) DNA polymerase III DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sbe
Candidatus Saccharibacteria bacterium RAAC3_TM7_1
Pathway
sbe03030
DNA replication
sbe03430
Mismatch repair
sbe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RAAC3_TM7C01G0845 (dnaE)
03430 Mismatch repair
RAAC3_TM7C01G0845 (dnaE)
03440 Homologous recombination
RAAC3_TM7C01G0845 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbe03032
]
RAAC3_TM7C01G0845 (dnaE)
03400 DNA repair and recombination proteins [BR:
sbe03400
]
RAAC3_TM7C01G0845 (dnaE)
Enzymes [BR:
sbe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RAAC3_TM7C01G0845 (dnaE)
DNA replication proteins [BR:
sbe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RAAC3_TM7C01G0845 (dnaE)
DNA repair and recombination proteins [BR:
sbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RAAC3_TM7C01G0845 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
PAZ_4
DUF655
Motif
Other DBs
NCBI-ProteinID:
AHB42683
UniProt:
V5RWC0
LinkDB
All DBs
Position
complement(747130..750771)
Genome browser
AA seq
1213 aa
AA seq
DB search
MGNVLQPSDYVHLHNHTHHSLLDGLTKVDELVERVKELGMTACAVTDHGTMSGVIEFYKA
ATAAGVKPIIGIEAYVAARSRFDRDPAKDKARYHLTLLAMNNQGYKNLMMLSSKANLEGM
YYKPRVDHELLEQYNEGIIVLSGCASGELGEHLKLDNYEEAKRIASWYKKVFGDRYYLEL
QDHGHLESPAAWEVQVKINAHLARLSEELGIARVVTSDGHYLRHDDQEAHEILLCVGTAA
YLSDERRMSLKDFELHVTEPEEIIARWQKTDPEAIANTRRIADRCEVTIELGNILIPRFP
VPDGETEKSYLDKLVYRGLARRYTGMDADEVEALSVEVIRPKLSEEVIGRLDMELAVLDK
MGYNGYFLIVQDFINWGKSQGIIFGPGRGSAAGSIIAYALNITDLDPLKYDLLFERFLNP
DRISMPDIDIDIQDTRRGEVIEYCANKYGSERVANIVTFGKMAARAAVRDVARVLEVPYA
ESDRLAKMIPPPVQGRHIPLKKSIENDPDLQREYENNPTAKRVFDYAIRLEGTIRSHGVH
AAGVVIAPDDIVNYTPLEMAQKGVIATQYPMVPVEELGLLKMDFLGLSNLTIINNALRII
KKVYKNDIILADIPLDDAKTYELFQRGDTTGVFQLESAGMKRYLRELKPTVFEDIIAMVA
LYRPGPMQFINSFIRRKHGDEQIKYLHEGMKNSLESTYGILVYQEQFMQISKEWCGFTGG
QADTLRKAVGKKKIDLMQKVKPEFVEGAVKHGGATKEVAEKFWDQLEEFANYCFNKSHAA
CYGLISYWTAYLKSHYPDAFMAALMTSDQDDIERLAIEIAECRHMGLTVLAPDVNESFVE
FAVVPGERTIRFGMAAVKGVGVGAVEEILRAREDGKFVSVEDFAKRVSTSKFNKKAWESL
IKSGGFDSLGNRSDLLFNLESIQAFASKLQKDALSGQTDLFGDLTGNSDIQPSVTLSQAP
VHHTERERLTWERELLGLYISAHPLDNYEAYFSEQTIPLSSLTPEIDNKKVTVGGIITSV
RTIITKSGSKMAFVGIEDKMGESEIIVFPDLYGQSINILQQDKVVRTTGKVNARDRDGNI
TTEAKIIADELIEVSDKELAEYESTGRAMKTPKASKTSAVTVTKKPAVVEKPVYVPETPK
NLKLYVHVKDPDDDTSLMFLKEECAKHPGIFDIVLVLGADKKSAIRLPFRVDTSDSLVAA
LIKQLGEDSVVLK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atggggaatgtgctgcagccgtctgattatgttcatttgcataatcacacgcatcatagt
ctgctcgatggactcacgaaggtcgatgagctagtcgagagggtaaaagagctcggcatg
acggcttgtgctgtcactgatcacggtacaatgagcggggtgattgaattttacaaagcg
gcaaccgccgccggggtcaagccgatcatcggtattgaggcctacgttgcggcgcgctct
cgttttgatcgcgatcccgccaaagacaaggcgcgttatcatttgacactactggcaatg
aacaaccaggggtataaaaacctgatgatgctttcttccaaggcgaaccttgaaggaatg
tattacaagccacgggttgaccatgaactacttgagcagtataacgaaggcattatcgtc
ctgagtggttgtgccagcggcgagctaggcgagcacctaaaactcgataactacgaggaa
gccaaacgtatcgccagctggtataaaaaggtatttggtgaccgctactatttggaactg
caagatcacggacatctggagtcaccggccgcctgggaagtacaggtaaagataaacgcg
catcttgccagactatccgaagaacttggcatcgcgcgcgttgtcaccagtgatgggcac
tatctaaggcacgacgaccaagaggcgcatgagatcctcctctgtgtcggtacagcggcg
tatttatctgatgagcgtcgcatgagccttaaagactttgagctccacgtcacagagccg
gaagaaatcattgcgcgttggcaaaagaccgatcccgaggcaatcgccaatacgcgccgg
attgctgaccgctgcgaggtgacaatcgagctgggcaatatcttgatcccgcgttttccg
gtgccagacggcgaaacagagaagtcatacctcgataagctggtctatcgtggtctcgcc
aggcgctacaccggtatggatgctgacgaggttgaggcactatcagtcgaagttatccga
cccaagctcagcgaagaggtcattggacgccttgatatggagcttgcagtactcgacaaa
atggggtacaacggctatttcctaatcgtccaggactttatcaactggggcaagtcgcaa
ggtattatctttggtccaggtcgtggctcggcggcaggtagtattatcgcctatgcactc
aatattactgatctcgacccgttaaagtatgatctcctttttgagcgctttctcaacccg
gatcgtatctcgatgcccgacatcgatatcgacatccaggatacccggcgtggtgaagtc
atcgaatattgtgcgaataagtatggttcggaacgtgtcgccaatattgtgacgtttggt
aaaatggcggcccgggcggcggtacgcgacgttgcccgggtgcttgaagtaccctacgca
gaaagtgatcgtttggcgaaaatgattccgccaccagtacagggtcggcacatcccgctg
aagaagagtattgaaaacgatccagacttacagcgtgagtatgaaaacaatccaactgcc
aagcgggtatttgactatgctattcggctagaggggacgatccgctcgcatggcgtccac
gcagcgggtgtagtgattgcgcccgatgatatcgtcaattatacgccgcttgagatggca
caaaagggtgtcattgcaacgcagtacccaatggtgccagtcgaagagctcggtcttctc
aagatggattttctgggactttccaacttaacgatcatcaataatgcgcttcgtatcatc
aaaaaagtctacaaaaacgatatcattctcgctgacattccactcgatgacgcgaagacc
tacgagctgttccaacgcggtgataccacgggcgtctttcagctagagtcggcgggcatg
aaacgatatctacgcgaattgaaaccgacggtatttgaggatattattgccatggtagcg
ctttaccgcccgggcccgatgcaatttatcaatagctttattcgccgtaagcatggcgac
gagcagatcaaatacttacacgagggtatgaaaaactcgctcgagagtacctacggtatt
ctcgtctatcaggaacaatttatgcagatttccaaagaatggtgcggtttcaccggtggc
caggctgatacgctgcgtaaggcggtgggtaagaagaagattgatctgatgcaaaaggta
aagccggagtttgtcgagggtgcggtgaaacacggtggcgcaacgaaagaggtcgccgag
aaattttgggatcagctggaagaattcgccaactactgtttcaacaaatcgcacgccgct
tgctatggcttgatctcgtactggactgcgtacctaaagtcgcattatccggatgccttt
atggccgcgctcatgaccagcgaccaggatgacattgaacggctggcgattgagatcgct
gagtgtcgtcatatgggactgacggttcttgcaccggacgttaacgaatcgttcgtcgag
ttcgccgttgtgccgggtgagcgtacgatccgctttggtatggcggcggtcaagggtgtc
ggcgttggtgctgtcgaggagatcctgcgggcgcgcgaagacggaaaattcgtcagcgtt
gaagacttcgctaagcgtgtctcgacctcgaagttcaacaaaaaggcttgggagtcactg
attaaatctggtggtttcgactcactcggtaaccgctctgacctattattcaatcttgag
agcatccaggcgtttgccagcaagttgcaaaaggatgcactgagcggtcagaccgatctg
tttggtgacctcactggcaacagcgacattcaaccgagtgtgacgctgtctcaagcaccg
gtacatcataccgagcgtgagcggctgacatgggagcgagaactactcggcctctacatc
agcgcgcatccacttgataactatgaagcgtactttagcgaacaaacgattccactcagt
agtctgacgccggaaattgacaataaaaaagtgacagtaggcggaattatcacttcggtg
cgaactattatcaccaagtccggatcgaagatggccttcgtaggtatcgaggacaagatg
ggtgagtcggagattattgtcttccccgatctgtacggacagtcgatcaatattttacag
caggataaagtggtgcggacgactggtaaagtcaacgcgcgcgatcgtgatggtaatata
acaaccgaagcgaagattattgccgatgagctgatcgaagtcagtgacaaggaactggcc
gaatacgaatcgactggccgagctatgaaaacaccgaaagcaagtaaaacaagcgccgtg
acggtgacaaagaagccggcggttgtcgagaagccggtctatgtgccggaaacgccgaag
aacctgaagctgtatgtccacgttaaagaccctgatgacgatacaagtctaatgtttttg
aaggaagaatgcgcgaaacatcccggcatcttcgatatcgtcctggtactcggcgccgac
aagaaatcagccattcgcttgccattccgcgtcgatacaagtgatagtctggtggccgcg
ctcatcaagcagctcggcgaagatagcgtcgttttgaagtaa
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integrated database retrieval system
