Salmonella bongori NCTC 12419: SBG_2947
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Entry
SBG_2947 CDS
T01579
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor (sigma-N)
KO
K03092
RNA polymerase sigma-54 factor
Organism
sbg
Salmonella bongori NCTC 12419
Pathway
sbg02020
Two-component system
sbg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sbg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SBG_2947 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SBG_2947 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbg03021
]
SBG_2947 (rpoN)
Transcription machinery [BR:
sbg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SBG_2947 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
CCC32001
UniProt:
A0A0K0HF32
LinkDB
All DBs
Position
3221397..3222830
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AA seq
477 aa
AA seq
DB search
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALENNPLLEQTDLHDEIDTQQ
PQDNDPLDTADALEQKEMPEELPLDASWDEIYTAGTPSGPSGDYIDDELPVYQGETTLSL
QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVSLDDILESMGDEEIDLDEVEAVLK
RIQRFDPVGVAAKDLRDCLLIQLSQFDKSTPWLEEARLIICDHLDLLANHDFRTLMRVTR
LKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYIIPDVLVRKHNGRWTVELNSDSIPRLQIN
QHYAALCNNARNDADSQFIRSNLQDAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE
YMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTSLLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactcaggcttagccaacaactggcgatgacgcctcagctacaa
caggccatccgtctgttgcagttgtctacgctggaacttcagcaagagcttcagcaagcg
ctggaaaataacccgctgcttgagcaaaccgatcttcatgacgaaatcgacactcagcaa
cctcaggataacgatcctctcgataccgcagacgcgctcgaacaaaaagagatgccagaa
gagctgccgcttgacgccagttgggatgaaatttataccgccgggacgccgtccggcccc
agcggcgattatatcgacgatgaattacccgtgtatcaaggcgaaacgacgctgtcgttg
caggattatctgatgtggcaggttgaactgacacccttctcggataccgatcgcgctatt
gcaacatctattgtcgatgcggtagatgaaaccggttatctcaccgtctcgctggatgac
attctcgaaagcatgggcgatgaagagattgatcttgatgaggtcgaggccgttctgaag
cgtattcagcgcttcgatcccgtaggcgttgcggcgaaagatcttcgcgactgcctgctg
attcagctttcacagttcgacaagtccacgccgtggctggaagaggcacggctcattatc
tgcgatcatcttgatctgctggccaaccacgacttccgcacgctgatgcgtgttacccgc
ctgaaagaagacgtactgaaagaggcggtaaacctgattcaatcgctcgatcccagaccc
ggtcagtcgatccagaccggtgaaccggagtatattatcccggacgtactggttcgcaag
cataatggtcgctggacggtagaacttaatagcgacagcattccacgtttacagattaat
cagcactatgctgctctgtgcaacaacgcgcgcaacgacgccgacagccagtttattcgc
agtaatttacaagatgcgaaatggctgataaaaagccttgagagccgtaacgatacgttg
ctgcgcgttagccgctgcatcgtggagcaacagcaggccttttttgagcagggcgaagaa
tatatgaaaccgatggtactggcggatatcgcccaggccgtcgagatgcacgaatccacc
atctcccgcgtgaccacgcagaagtatctgcacagtccacgcggcatttttgaactcaag
tatttcttttccagccacgtcaataccgaaggcggaggcgaagcctcttccaccgccatc
cgtgcgttggtgaagaagttaattgcggcggaaaaccccgcgaaaccgctgagcgacagt
aagttaacctctctgctgtcagaacagggtatcatggtggcgcgccgcactgttgcgaag
taccgagagtctttatccattccgccgtcaaaccaacgcaaacagctggtttga
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integrated database retrieval system
