Salmonella bongori NCTC 12419: SBG_3292
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Entry
SBG_3292 CDS
T01579
Symbol
rfaD
Name
(GenBank) ADP-L-Glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
sbg
Salmonella bongori NCTC 12419
Pathway
sbg00540
Lipopolysaccharide biosynthesis
sbg01100
Metabolic pathways
sbg01250
Biosynthesis of nucleotide sugars
Module
sbg_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sbg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SBG_3292 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sbg01005
]
SBG_3292 (rfaD)
Enzymes [BR:
sbg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
SBG_3292 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
sbg01005
]
Core region
SBG_3292 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
CCC32343
UniProt:
A0A0K0HFG4
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All DBs
Position
3614427..3615359
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AA seq
310 aa
AA seq
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MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQI
MSGEELGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY
GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLESGVSGIFNLGTGRA
ESFQAVADATLAYHKKGSIEYIPFPDKLKGRYQAFTQADLTNLRNAGYDKPFKTVAEGVT
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgttacaggcggcgcgggctttatcggcagcaatatcgttaaggctctgaat
gataaaggtatcaccgatattctggtggtagataacctgaaagacggcaccaagtttgtg
aacctggtggatctcaatattgctgactatatggataaggaagatttcctgatccagatt
atgtccggcgaggaacttggcgatattgaggctattttccatgaaggcgcctgctcttcc
actaccgagtgggatggcaaatacatgatggataataactatcaatactccaaagagctg
ctgcactattgccttgagcgcgaaattccgttcctgtatgcctcttctgccgccacctat
ggcggtcgcacctccgatttcatcgaatcgcgcgaatatgaaaaaccgcttaacgtatac
gggtactccaaattcctgtttgatgaatacgtgcgccagatcctgccagaagcaaactcc
cagattgtcggttttcgctatttcaacgtctatggaccgcgtgaaggccataaaggcagc
atggcaagcgttgcatttcatctgaatacgcaattaaacaacggcgaaagcccaaaactg
tttgaaggtagcgaaaacttcaagcgtgatttcgtctatgtgggcgatgtcgctgacgtt
aacctgtggttcctggagagcggtgtttcgggcatctttaacctgggcacaggccgtgcg
gaatccttccaggccgtcgccgacgcgacgctggcgtatcataaaaaaggtagcattgag
tacattccattcccggataagctgaaagggcgctatcaggcgtttacgcaggcggatttg
acgaatctgcgtaatgcaggttacgacaaacccttcaagaccgtcgccgaaggggtaacg
gaatatatggcctggctgaaccgcgacgcgtaa
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