Shewanella baltica OS155: Sbal_0004
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Entry
Sbal_0004 CDS
T00478
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sbl
Shewanella baltica OS155
Brite
KEGG Orthology (KO) [BR:
sbl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbl03032
]
Sbal_0004
03400 DNA repair and recombination proteins [BR:
sbl03400
]
Sbal_0004
Enzymes [BR:
sbl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Sbal_0004
DNA replication proteins [BR:
sbl03032
]
Prokaryotic type
DNA Topoisomerases
Sbal_0004
DNA repair and recombination proteins [BR:
sbl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Sbal_0004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Caud_tail_N
Motif
Other DBs
NCBI-ProteinID:
ABN59541
UniProt:
A3CYH8
LinkDB
All DBs
Position
3850..6267
Genome browser
AA seq
805 aa
AA seq
DB search
MSENSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCSDI
TITIHVDGSVSVKDDGRGIPVSIHEEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVG
VSVVNALSKKLQMTIRRAGKVYEQFYTHGVPDAPIKEIGDATKTGTEIRFWPSEDTFSDV
EFHFEILAKRVRELSFLNSGVGIRLIDERDNKNEFFKYEGGISAFVDYLNRNKTPVNKDV
FHFMQEREDGITVEVAMQWNDGYQENIFCFTNNIPQRDGGTHLVGFRSALTRNLNSYMEN
EGYNKKGKTSATGDDAREGLTAVISVKVPDPKFSSQTKDKLVSSEVKTAVEQTMGEKLND
YLLENPADAKLIVGKIVDAARAREAARKAREMTRRKGALDLGGLPGKLADCQEKDPGLSE
IYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG
RDEYNPDKTRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYVYIAQPPLFKVKK
GKQEQYLKDEPALTQYLTTQALDGTIVYPTQGAIGMSGEPLERLVTQYREVEAIVARLEQ
RYPTHITNRMLYHPMITNDMLADEGKMKEWIDAFIHELVEMESSGVLYSAEPILDPERKV
YLPKITIRKHGIDTNYLFTYDFFQSSDYQRIGKLGAALDGMIEEGGYVQRGERVKEVGSF
LEALDWTISEAKRGLYIQRYKGLGEMNPEQLWETTMDPESRRMLQVTIDDAVGADQLFTC
LMGDQVEPRREFIEANALNVANLDV
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaatagttacgattcttcgagtattaaggtccttaagggccttgatgcagta
cgtaagagacctgggatgtatattggtgacaccgacgacggtacgggtctacatcatatg
gtgttcgaagtagtcgataactctatcgatgaagccttagccggccactgcagcgatatt
accattactatccatgtcgatggttcggtttctgttaaggatgacggccgtggtattccg
gtctctatccatgaggaagaaggcgtatcggcagcagaagttatcatgacggtattgcat
gccggcggtaagttcgacgataactcctataaagtgtctggcggtctccacggtgtgggt
gtatcggttgtaaacgctttatctaaaaagctgcaaatgaccattcgtcgtgctggcaaa
gtgtacgagcagttttatactcacggtgtgcctgatgcgccaatcaaagagattggtgat
gccactaaaaccggtactgaaatccgtttttggccaagtgaagatacctttagcgatgtc
gagtttcactttgaaattctcgcaaagcgtgtgcgtgaactgtcattccttaactcaggc
gtaggtattcgtctgattgatgaacgtgacaacaagaatgaattcttcaaatacgaaggc
ggtattagcgcattcgtagattatttgaaccgtaataaaacacccgtcaacaaagacgta
ttccactttatgcaagagcgtgaagatggcattaccgttgaagtggctatgcagtggaat
gacggttaccaagaaaatattttctgttttaccaacaacattccacagcgtgatggtggt
actcacttagtcggtttccgtagtgcgttgacgcgtaacctcaacagctacatggaaaac
gaaggctataacaagaaaggcaaaactagcgcgactggcgacgatgcccgtgaaggtttg
actgccgttatctctgttaaagtgcctgatcctaagttcagctcgcaaaccaaagataaa
ctggtttctagtgaagtgaaaaccgcggttgaacaaaccatgggtgagaagctgaacgat
tatctgctggaaaatccagccgatgcgaagttgattgtcggtaagattgtcgatgcggcc
cgagcccgtgaagcggcgcgtaaagcccgtgaaatgacccgtcgtaaaggcgcactcgat
ttaggtggtttgccaggtaagctggccgattgccaagaaaaagatccaggtctttcagaa
atttacatagtggaaggtgactctgctggcggtagcgctaagcagggacgtaaccgtaag
aaccaagcgattctgccactgaaaggtaaaattctaaacgttgagaaagcccgcttcgat
aagatgttgtcttctcaagaagtggccacactgatcacggcgctcggctgtggtattggt
cgcgacgaatataacccagataaaactcgttatcacaacatcatcatcatgacggatgct
gacgtcgacggctcgcacattcgtaccttgctgttgaccttcttcttccgtcaaatgcct
gaattgattgaacgtggttatgtgtatattgctcagccaccactatttaaagtgaaaaag
ggcaagcaagaacagtatttgaaagacgagccagcattgactcaatatctcacgactcaa
gcattggatggcactattgtgtacccaacccaaggtgcgattggtatgtcaggtgagccg
ttagagcgtttagtgactcagtatcgtgaagtggaagccattgttgcccgtttagagcag
cgctatccaacgcacattactaaccgtatgctttaccacccaatgatcaccaacgatatg
ttggccgatgaaggcaagatgaaagagtggatcgatgcctttatccatgagctggtggaa
atggaaagcagcggcgtactgtattctgctgagccgattctcgatcctgagcgtaaagtg
tatctgcctaagatcaccattcgtaaacacggtatcgatactaattatctgtttacttat
gacttcttccaatcaagcgattatcaacgtatcggtaagttaggtgcggcgttagatggc
atgattgaagaaggcggctatgtacaacgcggcgaacgtgttaaagaagtcggtagcttc
cttgaagcgctagattggacgatttctgaagccaaacgcggcttatacattcaacgttat
aaaggattgggtgagatgaaccctgagcaattgtgggaaactacaatggatcctgaatca
cgtcgtatgttgcaagtcacgattgatgatgccgtgggtgccgatcagttgttcacttgt
ttgatgggtgaccaagttgaacctcgtcgtgagttcatcgaagcgaacgcattgaacgtg
gctaacttagacgtgtag
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